Gene PHATRDRAFT_10972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_10972 
Symbol 
ID7198082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp908420 
End bp908995 
Gene Length576 bp 
Protein Length191 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178600 
Protein GI219115609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGTCCAAGCC TCTGGGAAAA AGAGGCACTG GCACGTTGGA TGGTACACTC GCTGGACTGG 
GGTGTGCTCA CAACTATAAG CAGTCGCCTG CCTGGAGTCA AGCCGTTTGG AAACGTCTAC
AGTTTCGTCG ATGGGCAGTG TAGCAATTCT ACCGGCACGC CGTATTTCTA CGGAACCTAT
CTGGATCAAT CGTTCCAAGA TATTCGAGAG AATCCCAGCG TTTCTTTGAC ATTGAGTGAG
GCGTCGCTTC CGTCCGTTTG TGGCGGAAAG GCATCGAAGT CGTGTTCAAT AACCGGGTCG
AACCTGGGAG ATCCGGAGAA TCCGGTGTGT GCGAGACTCA CGTTGACCGG AACCCTCGAG
CAAGTCCCGT TCGAGTCAGA GGAGTACGCG ATGGCTCAAC AGGCCTTCTT TGAGCGGCAT
CCACAAATGG ATTACTGGCC ACAGGATCAC CACTGGATAA TTGCCAAGTT GGAAATCGCA
GACATTTGGC TCATCAATTA CTTTGGGGGG GCCAAGATTT TGCCCGTTGA CGCATACTAT
GGCGCTAAAT TAGAGTTCGG CTCCGTGCAA GACTAG
 
Protein sequence
RPSLWEKEAL ARWMVHSLDW GVLTTISSRL PGVKPFGNVY SFVDGQCSNS TGTPYFYGTY 
LDQSFQDIRE NPSVSLTLSE ASLPSVCGGK ASKSCSITGS NLGDPENPVC ARLTLTGTLE
QVPFESEEYA MAQQAFFERH PQMDYWPQDH HWIIAKLEIA DIWLINYFGG AKILPVDAYY
GAKLEFGSVQ D