| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_10896 |
|---|
| Symbol | |
|---|
| ID | 7197880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011672 |
|---|
| Strand | - |
|---|
| Start bp | 507532 |
|---|
| End bp | 508047 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178526 |
|---|
| Protein GI | 219115461 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCTTCCT GCATTTCCAC CGTGACCTGC TCGGTCGTTT CGACGCCACA AATGATGATC
ACGGACAACA TCATGGCTGG CAACTACCCG AATCTCGGGG CTGCCATTCG TGGGCTCTAC
CGGGAACGAG GTGTACTGGC GTTCTACCGG GGGTGGTGGC CCGGTTTGGT GGGCAAGATT
CCCTCCTACG CTCTCACCTG GACCTTTTTC CAACAGCTCA AGACGGCACG AGATCGACTT
TCGGATCGAC CCGCCTCGGA TATCGAAAAC TCCGCCATGG GATGCTTGGC CAGTGCCACC
ACGGTTTGCA TTATGATTCC CATGGACACC ATCAAAACTC GATTAGTAAC GCAAACGACC
GGGGTCGGCG CGGAACTGGC CTATAAGGGT ATTGTAGACT GCGCGATTCG AGTCTTTCGG
GAAGAAGGCA TCGGTACCTT TTACCGAGGA TTGCCACCCC GGCTAGTCAG TGTAGTACCG
ATGATTGGGA TTCAGTTTGG TGTGTACGAG GCCATG
|
|---|
| Protein sequence | LSSCISTVTC SVVSTPQMMI TDNIMAGNYP NLGAAIRGLY RERGVLAFYR GWWPGLVGKI
PSYALTWTFF QQLKTARDRL SDRPASDIEN SAMGCLASAT TVCIMIPMDT IKTRLVTQTT
GVGAELAYKG IVDCAIRVFR EEGIGTFYRG LPPRLVSVVP MIGIQFGVYE AM
|
|---|
| |