Gene PHATRDRAFT_10865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_10865 
Symbol 
ID7198102 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp1021721 
End bp1022844 
Gene Length1124 bp 
Protein Length323 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178348 
Protein GI219115105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCTTGG CGGACTTGAC CAAGCACACA ATCCTGGGGG CTGGAACGTT CGGCCAAGTA 
TGGCTCGTGT CGCGCCCAGG AGCGGATGGT AACGATAGAG CATACGCATT GAAGGTACAA
TCCAAGTACG AACTTTCTCA AAGCGGGCAA GCTCGCTCCG TTGTCCACGA AAAAGAAATT
ATGGCGGGCC TGAACCATCC GCTAGTCAAC CGGCTATTGG GGGCGTTTAA GGACGTAGAC
TATATTTACA TGCTCATGAA CCTGGTCCAA GGAGGTGAGC TGTATGGTGT CATGCACACT
TCGACGAGCG ACAAGTTGTC GGAAAATGTC TCGAAGTTCT ATATTGCCGG AATTGCTGAA
GGACTTGGAT ACATGCATAG CCGTGGATTT GTGTATCGTG ATTTAAAACC TGAAAACGTG
CTCATTAGCA ACGAAGGTTA CCCAGTAATC ATCGACTTTG GATTCGCAAA ATACGTTTCG
GACATGACCT ATACTTTATG CGGAACTCCG CTTTATCTTC CTCCTGAGGT CATTCTGAAT
CGCGGCCACA AGTGAGTGAT GCAAAAGTAA CGGTTCAAAG ATTGCTGTAT TTTTGAGCTC
ACGATTTTTT TCTTCAAATC AGTTGGGGCT GTGATCATTG GTCATTGGGA GTTTTGCTCT
ACGAAATGAT TCTTGGTTAT ACGCCGTTCT ACGTCGATGT ACGTACCGGT ATTGGGTTTT
TCTTGCTCTC TCAATGATCA AATCTCACGA TCCTTTTCTG TATCTTCTTA AAGGGAATGG
ATCAAATTGA GCTTTTCCGA GCCATAGTGA AAGGCAAATT TTCTCTTCCA AAATGGATTT
CAGCTGAGGC TAACAGCTTG ATGAGTGGAC TCTTGACCCG TGATCCGCGC AAGCGCCTCG
GTAGCCTATC AGGGGGCGAA AATGACATAG CCAAACATCC ATTTTTTACA GATACAGACT
TTGGCAAAAT CCGTCGTATG GAATATCCAG CTCCTTATGT TCCCAGTATT AAGAACCCGC
TGGACGCCTC AAATTTCGAG AGCTGGACGC ACGTAAACGA CAAGCTGAAG ACGAAATATC
CCAAGCTTAC CCGTGAAGAA GCCAAGATCT TTGACAATTT CTGA
 
Protein sequence
LSLADLTKHT ILGAGTFGQV WLVSRPGADG NDRAYALKVQ SKYELSQSGQ ARSVVHEKEI 
MAGLNHPLVN RLLGAFKDVD YIYMLMNLVQ GGELYGVMHT STSDKLSENV SKFYIAGIAE
GLGYMHSRGF VYRDLKPENV LISNEGYPVI IDFGFAKYVS DMTYTLCGTP LYLPPEVILN
RGHNWGCDHW SLGVLLYEMI LGYTPFYGMD QIELFRAIVK GKFSLPKWIS AEANSLMSGL
LTRDPRKRLG SLSGGENDIA KHPFFTDTDF GKIRRMEYPA PYVPSIKNPL DASNFESWTH
VNDKLKTKYP KLTREEAKIF DNF