Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_10848 |
Symbol | |
ID | 7197617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 1020433 |
End bp | 1021215 |
Gene Length | 783 bp |
Protein Length | 261 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178347 |
Protein GI | 219115103 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCGTACAAAC CGCCAGTCTT CCCAAAGTCG GAAGAAGAAA AGTTTTTTAT CAAACGAGCT CTCCTCAAAA GTTTCGTTTT TGAGAACATG TCGCCTTCCG AACTCTTCCC TCTCATTCAG GCTTTTGAAA AGGTTCAAAT CCCCGCCGAG GAGGTGATTA TTAAACAAGG TGATGATGGT GATTATTTCT ATGTTCTCGA AGAAGGAATT TGCATTTACT CTGTGAATGG CATCGTTGTC GGTGAGCCCG CCAAACCGGG CGATTCCTTT GGCGAGCTAG CGTTAATGTA TACGTGCCCT CGTGCCGCGA CCGTGATGAC TACGACAGCC GCTACGCTCT TTCGTGTTGA TCAAAGATCC TTCCGTTATA TTCTGCAAGC TCAATCGAAA CAAAGCGCCA AAGCAAAAAT CGATTTTCTG AACAAGGTTT CATTTCTCCA AGATTTAGCG CCACAAGACA TACAGAAGCT TTCGACGGTC ATGCTGTCGT GTCCTTTTAA GCAGGGTGAC GTTATTGTGA CCAAAGGGGG TGAGAGGGTT GCATTCTATA TAGTGGAGGA GGGAACATTG ATAGCAACAG ACGTCGGTGA TGGCGATTCA AAGTACGAGG ACTTGCCCAT CAAAGCGGGT GAGCACTTCG GAGAGCGGGC TATTGTTACA GGAAAGCCAC CGGTCTGCAA TATCGTTGCC CAAACAGATG GTCGACTGTT CACCATTGAC AAGGATACGT TTTCCCAGGT TCTCGGAAAT TTGGATGACT TGGTTTTGCG TTCGCTGGAT AAA
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Protein sequence | AYKPPVFPKS EEEKFFIKRA LLKSFVFENM SPSELFPLIQ AFEKVQIPAE EVIIKQGDDG DYFYVLEEGI CIYSVNGIVV GEPAKPGDSF GELALMYTCP RAATVMTTTA ATLFRVDQRS FRYILQAQSK QSAKAKIDFL NKVSFLQDLA PQDIQKLSTV MLSCPFKQGD VIVTKGGERV AFYIVEEGTL IATDVGDGDS KYEDLPIKAG EHFGERAIVT GKPPVCNIVA QTDGRLFTID KDTFSQVLGN LDDLVLRSLD K
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