Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_10805 |
Symbol | |
ID | 7197660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 474408 |
End bp | 475142 |
Gene Length | 735 bp |
Protein Length | 245 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178520 |
Protein GI | 219115449 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.689301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATGGG CAGAAGGAAG AATATCAAAT TTTGATTACT TGCTACACCT CAACATGCTT TCCGGGAGAA GCTACAATGA CATATGCCAA TACCCTGTGA TGCCTTGGGT ACTATCGAAC TACACATCCA ACGAAGTTCC CGACTTGAGA GACCCTCGAA ACTTTCGCGA TCTTTCAAAA CCAGTCGGCG CCTTAAATCC AGAACGGCTT GCAGATTTTA TTGAACGATT CAGCACGTTT GCTGATCCTT CAATTCCACC ATTCATGTAC GGTAGTCATT ACTCGACGAG TGCTGGTGTT GTGCTTCACT TCCTCGTTCG TCTTCATCCT TTTGCTGGTC TCCATCGTCA GCTTCAATCC GGTTACTTTG ATGTTGCTGA TCGTCTATTT AGCTCAGTTG CCAGAACATG GAGTATGTGT ACGGGTTCTT CAGCAGCAGA AGTCAAAGAG CTTACTCCTG AGTGGTACTG CAACCCAGGT TTTTTGAAAA ATAAGAACGA TTTTAAATTG GGGACAGCGC AGGATGGAGA CGTCTTGGGC GACGTTATCC TTCCTCCTTG GGCTGATGAA AGCCCTGAGA AGTTCATCGA GGTAATGAGA GCTGCCTTAG AGAGTGAGGT ATGTTCTGCA ATGCTACCAG ACTGGATTGA TTTGATATTT GGTCGAAAAC AACAAGGGCC CGAGGCTATC AAGGCAAACA ACGTATTCTT TTATTTGACT TATTACGGCT CAGTT
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Protein sequence | MGWAEGRISN FDYLLHLNML SGRSYNDICQ YPVMPWVLSN YTSNEVPDLR DPRNFRDLSK PVGALNPERL ADFIERFSTF ADPSIPPFMY GSHYSTSAGV VLHFLVRLHP FAGLHRQLQS GYFDVADRLF SSVARTWSMC TGSSAAEVKE LTPEWYCNPG FLKNKNDFKL GTAQDGDVLG DVILPPWADE SPEKFIEVMR AALESEVCSA MLPDWIDLIF GRKQQGPEAI KANNVFFYLT YYGSV
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