Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_10782 |
Symbol | |
ID | 7197624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 1069052 |
End bp | 1070305 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178634 |
Protein GI | 219115677 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTTGATAAAC CGTCGCCAAT TCAGGCTCAA TCCTGGCCCA TTCTGACGCA ACTTAATAAT GGTCGTAAGC GTGATATCGT TGGAATCGCT GAAACTGGGT CGGGAAAGAC ACTTGCATTC GCTCTACCTG CGTTGTCGGC GATGTCAGAA GATACGTCGA CACGAAAACG ACGATTGCCT CGCATGCTGG TTCTGGCACC CACACGAGAA CTTGCCATGC AGTCGGATGA AGTTCTGAAA GAATTTGGCG CCGTCGTTAG CATCAAATCG TTGGTCGTTT ATGGGGGCGT TCCCAAGTAC GAACAGAAAA ACGAACTCAA AAAGGGAGTC GATTGTGTCG TGGCCACCCC AGGCAGAATC AAGGATTTAA TTCAGGAACG TGCTTGCGAT TTAAGCGCCG TTGACTATTT GGTGCTTGAC GAGGCTGATC GTATGCTTGA TATGGGATTT GAAGAAGATG TTCGCTTTAT TATCTCCAAC TGCAAATCCA AGGAACAAGG TCGACAAACG GCAATGTTTT CGGCGACTTG GCCTGCTGCG ATCCAAAAAA TAGCCATGGA TTACATGGTT GACCCAATCC GCGTGTATGT TGGCTTTGAA TCAATAGTTG GTAGCAATGG TGGAGGAGTT GACGATTCGC TTTCCGCCAA TAAACGTGTA ACGCAGATTG TCGAAGTGGT TGAAGATAGA GCGCGGGATG CCCGCCTTCG TGACATATTG CGCAAGGTAC ATATGAAACG AGATAACCGT GTTTTGGTCT TCGGCCTATA CAAGAAAGAG GCCGAGCGCT TGGAATACTC TTTAAGAAAA GACGGCTGGG ATTGCTGCTC GATCCACGGC AACAAAACTC AGGTTGCTCG AACGGCAGCA CTAGCACAGT TCAAGGACGG TAGCTGTCCG CTCTTAATCG CAACCGATGT CGCCGCTCGA GGTTTGGATA TCCCGAATGT AGAGGCTGTC ATCAACTTCA CTTTTCCGTT AACGATTGAA GACTATGTTC ATCGCATTGG ACGAACGGGA CGCGCAGGGA AAACGGGGGT CAGCTATACC TTTTTTCAGC CCGGCGACAA ATCGCACGCT GGCGAGCTTC AGCAGGTAAT GAAGCAAGCT GGTCAAGAAA TTCCAGAAGA TCTCATGAAG TTTGGCAGTA CAATCAAGAA AAAAGAGCAC AAGTTGTACG GGAATTTTGG ACCATCTGGA GGTATGGCAA TGAAAAAGGC GGTGAAGATA ACATTCAACT CGGACGAAGA ATAG
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Protein sequence | FDKPSPIQAQ SWPILTQLNN GRKRDIVGIA ETGSGKTLAF ALPALSAMSE DTSTRKRRLP RMLVLAPTRE LAMQSDEVLK EFGAVVSIKS LVVYGGVPKY EQKNELKKGV DCVVATPGRI KDLIQERACD LSAVDYLVLD EADRMLDMGF EEDVRFIISN CKSKEQGRQT AMFSATWPAA IQKIAMDYMV DPIRVYVGFE SIVGSNGGGV DDSLSANKRV TQIVEVVEDR ARDARLRDIL RKVHMKRDNR VLVFGLYKKE AERLEYSLRK DGWDCCSIHG NKTQVARTAA LAQFKDGSCP LLIATDVAAR GLDIPNVEAV INFTFPLTIE DYVHRIGRTG RAGKTGVSYT FFQPGDKSHA GELQQVMKQA GQEIPEDLMK FGSTIKKKEH KLYGNFGPSG GMAMKKAVKI TFNSDEE
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