Gene PHATRDRAFT_10704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_10704 
SymbolCDKC1 
ID7198070 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp845979 
End bp847160 
Gene Length1182 bp 
Protein Length355 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178587 
Protein GI219115583 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.834566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCGCA CGCTCGCGCA CTACGAGCGC CAGGAACAGA TTGGGGAAGG CACGTACGGT 
CAGGTGTACC GAGCGCGGTG CAAGGACACG GGTCGGGTCG TCGCGCTCAA GAAAATGCGG
ATGCACCACG GAGGTTACTG GGGCATGCCG CTACAGTTTA TTCGAGAAAT CAAAATTCTG
AAGAAACTCA CGCATCCGAA TCTGCTGCAA ATGATTGAAG TGGTCACCAG TAAGGGTGTC
GAGGAACTGG ATGAGGACGA TCCGATCACC AAACCACACA GCGGCAAGGC CAACGGCGCG
GAGAAAGATC GCGTCTCCGA CGCTAGGGAA AGCTACAAGG GGAATCTCTT TCTCGTTCTC
GAATACGTGT CGCACGATCT CACCGGTCTC ATGGACGTGG CTTACCAATT CACGGAAGTG
CAGGTCAAAT GCATTTTTCG ACAGTTGCTC GAAGCCTGCG CCTATATGCA CCAGCACAAA
TACGTGCACC GCGATATCAA AAGCTCCAAC ATTCTCTTGG ATTCCCATTT TCGCGTTAAA
CTCGCTGATT TCGGTCTGGC CCGCAACATT GAACCGCCCT TGTTGGATCA AATGCACGAC
CGAAGCAACA GCAGTAGCGG CAGCAGCAGC AGCAGTGTGG AATTCACCAA CAAGGTCATT
ACCCTCTGGT ACCGTCCACC CGAAATTCTC ACTGGCGCCA CGCAGTACGG ACCCGCAGTG
GACGTGTGGA GTGCCGGTTG TATTCTGGCC GAGCTGCTCC TGGGCAAGCC TTTACTGCCG
GGCAAGTCGG ATTTGGAACA ACTCAAACTC ATCGCGGACA TGCTGGGCAC ACCGGCTCCG
GATACGTGGG ACTATTTGTC GAGCATGAAA CGGGTTCGTT CCGGGGAAAT TACACTGGAC
ATGCGCAAAC CCAAAGTGTC GCGTTTGCGT GACAAATACG CGGCCAAAAT CCCCACGACT
GCCATGAACT TGTTGGACAA ATTGTTGGCT TGGGATCCCC GCAAGCGTCT AACGGCAACA
GGAGCCTTGC AAAACAAGTA CTTTTGGTCG CAACCAGTGG CGCCGGAAGA TCCAGCCGAA
CTGGGAGAAA TACAAGTCGG CCCCGGGGGA CATTTTCACG AATTTCAGAC AAAAAAGAAA
CGCAAAGAAG CCAAGATTGT GGCCGAAGCC GCCCGAGAAA AG
 
Protein sequence
MTRTLAHYER QEQIGEGTYG QVYRARCKDT GRVVALKKMR MHHGGYWGMP LQFIREIKIL 
KKLTHPNLLQ MIEVVTSKGK DRVSDARESY KGNLFLVLEY VSHDLTGLMD VAYQFTEVQV
KCIFRQLLEA CAYMHQHKYV HRDIKSSNIL LDSHFRVKLA DFGLARNIEP PFSVEFTNKV
ITLWYRPPEI LTGATQYGPA VDVWSAGCIL AELLLGKPLL PGKSDLEQLK LIADMLGTPA
PDTWDYLSSM KRVRSGEITL DMRKPKVSRL RDKYAAKIPT TAMNLLDKLL AWDPRKRLTA
TGALQNKYFW SQPVAPEDPA ELGEIQVGPG GHFHEFQTKK KRKEAKIVAE AAREK