Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_10674 |
Symbol | |
ID | 7197912 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 1225816 |
End bp | 1226781 |
Gene Length | 966 bp |
Protein Length | 290 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178665 |
Protein GI | 219115739 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.337525 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTCGCTGCCA TTAAGACCCT ACTCGGAGTC GTGCAGCGCT CTCGCGCCGA AACCATGATG GGCCTCCAGG ACGATCTCAA ACAAGCCGCC CAGCTCATGA TGGACAACTT CGCCACACAC CGCGACAGCG GAGCGGGTCG TTCGCATATT GCGCTACAGT CCGGCTGCGC CATGTTCCTC AAGTACGTCA CCCGCACCTT CCTCGAACTC TCCGATTTCG AAGCCTGCCG GCAAGCCGTA CTGGAACGCG GCGAGCGATT CCAGATGATC AGTCTCGCCG CGCGGGATCG CATCGCCAAG GCCGCCGTGG ACTTTATCCC ACCCAACGCT ACCGTACTCA CCCACGGATA CAGTCGCGTG GTCGCCGCAA TACTGTCGCA GGCGTCGCAG TCCCGACACT TTAGTGTGAT TGTGCTGGAA GGCCGTCCAG ACGCCAGTGG GCCGAAGATT GCGCAGTTCT ACGCACGCGA AGCCCATATT CCGGTCAAAA TTGTACTGGA CGCCGCCATG GCCTACATTA TGGAACAAGT CGATATTGTC CTCGTTGGCG CCGAAGGGGT TATGGAGAAT GGTGGGGTCG TCAACAAGCT AGGAACCTAC ACGCTAGCGA CGTGTGCCCA AGCGGCTGGC AAACCATTCT ACGTTGCCGC CGAGTCCTAC AAATTTGCCC GTATTTATCC ATTGCATCAA GCCGACCTCC CTCTCCATCC AATGGCACCG CTGGAATTTG TTGATACCAC CCAGACGACG GACGCACACA ATGGTAACGA TAACAAGAGC GACGATACCG ACAACACTGA CAATACTGCT CCAGTGTTTC AGGCCATCGC CCTGGATGAA TCGATCCAAG TCGTCAACCC TCCCGTAGAT TTCACCCCGG CCAAATTCAT TACACTGCTG TTTACCGACC TTGGAGTGCT GACGCCAAGC GCCGTATCCG ACGAGCTTAT ACGTTTATAT CAATAG
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Protein sequence | VAAIKTLLGV VQRSRAETMM GLQDDLKQAA QLMMDNFATH RDSGAGRSHI ALQSGCAMFL KYVTRTFLEL SDFEACRQAV LERGERFQMI SLAARDRIAK AAVDFIPPNA TVLTHGYSRV VAAILSQASQ SRHFSVIVLE GRPDASGPKI AQFYAREAHI PVKIVLDAAM AYIMEQVDIV LVGAEGVMEN GGVVNKLGTY TLATCAQAAG KPFYVAAESY KFARIYPLHQ ADLPLHPMAP LEFAIALDES IQVVNPPVDF TPAKFITLLF TDLGVLTPSA VSDELIRLYQ
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