Gene PHATR_5873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_5873 
Symbol 
ID7203898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand- 
Start bp1125857 
End bp1126414 
Gene Length558 bp 
Protein Length186 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186475 
Protein GI219113783 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCCGTGCTCG AGCAAGTGTG TTTAGGCGCG CTCGATGCGC ATGATCCGGG AACGGCCGAA 
GTCTGTTTGG ACAAACTCAA AGCGGCCGGC ATTGCCAAGG AGTCCACCCG CTTCCGCCGT 
TTGCTGGCAC GCTGTCTGGA AGGAGCGGAA GACTACGCCG GTGCGGAAAT CATTTACGAC 
GACTTGCTCA AAGAGAGCCC GGCAAACTTG CAAGCGTTGA AAAGAAAGTA CTGCATGTTG 
AAAGCTCAAG TCGGGAAAGA AGTCGAATCA ATGGAAGCAT TGAATGTGTA TCTGAAGCAG 
GTGTACGCGG ATTCGGGGGC GTGGTACGAG ATGGCGCGAT TGCGAAAAGA GCTCGGTGAT 
TTTAAGGGTG CAGCGTTTGC GCTTGAAGAA GTCATACTTG GAGTACCTTC AGACGCCAAA 
ATGCATGTCG AATTAGCAGA GTGTTACGCC ACAATAGGAG GAATGGAGAA TCTTCTCTCG 
GCGCGGAAAC ACATGGCACA GGCACTCGAA CTGGATGCCA CGGACCGCAG GGCACAGTTT 
GGCCTCGTCT CAGTTGCC
 
Protein sequence
AVLEQVCLGA LDAHDPGTAE VCLDKLKAAG IAKESTRFRR LLARCLEGAE DYAGAEIIYD 
DLLKESPANL QALKRKYCML KAQVGKEVES MEALNVYLKQ VYADSGAWYE MARLRKELGD 
FKGAAFALEE VILGVPSDAK MHVELAECYA TIGGMENLLS ARKHMAQALE LDATDRRAQF 
GLVSVA