Gene PHATR_5508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_5508 
Symbol 
ID7204316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp417698 
End bp418123 
Gene Length426 bp 
Protein Length142 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186057 
Protein GI219112947 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCAAG CGGAGAAGGG TTCGCTCAAG GACTTGGGCA AACGGATCAA GGCCAAGGGC 
CTCCAAAAAC TCAAATTCTA TTGCCAAATG TGCGAAAAGC AGTGTCGGGA TGCGAACGGT
TTCAAATGCC ACCTCACGTC GGAATCGCAT CTCCGCCAAA TGCAGATCTT CAGCGCCAAC
GCCGCGGGAA TTATGGACCA GTACAGTCGG GAGTTTTGTA AACTCTACGT CGACACCTTG
CGCATGCGGC ACACCACCAA CCGCACCAAC GCCAACCAAG TCTACCAGCA AGTCATTCAC
GACAAACAAC ACGTACACAT GAACGCGACC GTCTGGGCTA CACTCACCGA CTTTGTGCAG
TATTTGGGAC GGACTGGACA GTGCGTGGTG GAGGACACGG AACGGGGTTG GTACGTGACG
TACATC
 
Protein sequence
MPQAEKGSLK DLGKRIKAKG LQKLKFYCQM CEKQCRDANG FKCHLTSESH LRQMQIFSAN 
AAGIMDQYSR EFCKLYVDTL RMRHTTNRTN ANQVYQQVIH DKQHVHMNAT VWATLTDFVQ
YLGRTGQCVV EDTERGWYVT YI