Gene PHATR_54190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_54190 
SymbolANXA1 
ID7203868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp1004133 
End bp1005376 
Gene Length1244 bp 
Protein Length333 aa 
Translation table 
GC content46% 
IMG OID 
Productannexin 
Protein accessionXP_002186445 
Protein GI219113723 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.571399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGATTCCAT AATTCGCAAC GTCCATAGAG ACCCGAACTA CCTCAGCTAA TTTGTTTTAC 
AATTACACCA TGACGATTCC AATCTATCCT GGCATTGTGA AGGAAAATGA TCTTTCTCCC
GATCAAGGGT TTGGCTCCGA GATTGATGAC TTATGTCAAC AAATTAGAGA TGCCACTAAG
GGCTGGGGCG CCAACAAGCA AAAGGTGATT GACGCAATTG CGACGCAAAA CATAACCACT
CGATGCAAAA TGGCCATCCG CTACAAGGAA CTGTTTGAAC GCGAGCTTGT CGATGTCATG
AAAAAGGAAT TCTCTGGAGA TTTTGGCGTC GCTCTAGAAT TTCTCTCTTT GCCTTCGGAC
AAGGCCGAGT GCGCTATGAT TCGAAAGGCG TGTAAAGGTA TTGGAGCGCA AGTGAACGTG
GTTTGGTCCA TTGTTTGCGG ACGAACAAAC GAAGAAATGG ATCGACTCAA GAAGACCTAT
TTTACCATGT ACAACAAGGA TCTTGGTAAA CTCCTGGCCA GTGAGTTGCA TGGCGATATG
GAGCGTCTCG TCTTTAATTG CCTTCAAGGA GCCGAAGATG TATACGATCC ACAGTTCCAT
ACAGCGGAAA AGGCTATTGA AGAAGCGGAA GAAATTCACA GCAAGGGTCA AGGGCGATGG
GGAACGGATG GGCGTGGTAT TTTTAAGCTG TTATGCAAGG CTCCCCCGGA GCACATTGAG
AACATGAACA AGGCCTATGC TGACAAGTAC GGATTCACTT TGATGAAGGC AATGGAAAAG
GAAATGGGAG GCAACGTGAA AGAGGGTACC ATCTTCATGC TTGGTATGAA GCAAAAGCCG
TACGAAACAA TTGGAGATTT GATTCGCTCG GCCTGTGTGG GCTTCGGTAC AGATGAGCTT
CTTTTGACGA CTCTTTTGAT TCGTTACCAG CCCATCATGT CGGAAGTGAT GTCGGCACAC
ATCGAAAAAC ACGGAAAGAC TATCCATGAT CGTGTCCGCT CCGAAGTTGG AGGCAAGTTC
AAGGATTTGC TTCTCCAAGT TCTAAACACG GCTTGGCCGG AGCAAGGATG AGTGGCCGAA
GGCGCTTTTG TGAGAGGAAG GGATCTCTAG TTGCCCGACT TGCATTTCGT GTAGTTCCAT
CCTAGCAATT CACACCCAGT CAGACGAAAT GAGTTGAATC TCGTTGCTGT TTATCAACTT
GCATTACAGA GAAAAAATAT ATTAACATAA AACCCTACCC TTTT
 
Protein sequence
MTIPIYPGIV KENDLSPDQG FGSEIDDLCQ QIRDATKGWG ANKQKVIDAI ATQNITTRCK 
MAIRYKELFE RELVDVMKKE FSGDFGVALE FLSLPSDKAE CAMIRKACKG IGAQVNVVWS
IVCGRTNEEM DRLKKTYFTM YNKDLGKLLA SELHGDMERL VFNCLQGAED VYDPQFHTAE
KAIEEAEEIH SKGQGRWGTD GRGIFKLLCK APPEHIENMN KAYADKYGFT LMKAMEKEMG
GNVKEGTIFM LGMKQKPYET IGDLIRSACV GFGTDELLLT TLLIRYQPIM SEVMSAHIEK
HGKTIHDRVR SEVGGKFKDL LLQVLNTAWP EQG