| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_44250 |
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| Symbol | |
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| ID | 7204149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | - |
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| Start bp | 1455051 |
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| End bp | 1457666 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002186533 |
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| Protein GI | 219114706 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGTCTG GGAAATGGTC AAATCATCAA ACACGCCTGC GGCGAAAGCG TCCCTTCCCC
AGTTATACGT CTTGTCTTGC TTTCTCAACC ATTTCCGTGA CTGCAGTCGC TTTTTGTGTG
ATTTATTTGC TCTTCCATAC CGTCGCCCTT CACGTACTGA GTAATTTAGG CAGGGAGAGT
GATCATGTGT TCGCAGCTCT ACAGCATCAA TCCCTTCTCA GGGAGGAAGT GGTAGCGACG
GGAGCGGCAC TTTTAAGCGT TCCAGACTAC CCCGCACTTC CCAAAAAATC TGATATTACT
GTCACAGACT GGCATCAGAA GTTTGTAACT GTCGGTACGG AGCAAAGTGG GGTATTCAAT
GCGGTTACGA TTGATACCAA ACGAGCTGAA TCATTTTTGA TTACTCATGG AGCACAGGCT
ATCCGCAAGC CTCTTAGTGC TTATTTGGAA CCTGGTCTGA ATGACATTGT CCCAGGCACC
GGATCGCGGG GGGACCACAA AAATCCGAAA GACTTAGGAG TAGCCCCCGA AATTTACACG
CCGCTGCCTC TCCGTACCCA CACGCCTGAT GCCTTACGAA AGGTAGAATA TCCGCGAGTA
CAAACCTGTC ATGATATGCC GGGAAAATTT CCTATCGATC GAGGCCTAGA ACTGGACAAA
GATGGTCTGC CAATTGTTTG GAATGTCGGC GATACACTGA CTCCCGACGA CTTTCCGGAA
CAAGAAGTTC CATTCTGTCC TGTGGAAGCC GATCCCTATC TGCCTTGGAT TCACGATGTT
TTCCCTAGTC CAGATGGTAC CAGAGTTCAT TTCATCGCAC AAAATCGGCG GCGGTGTCGG
ACGGGTAAGA ACTTCTCACG GGAGGTCAAG CGTCTCGCGC CACAAGTAGC GTTGATGCAG
TCTGTCAGTG TCGAGCGGAT CGACGAAGTC CGGGCGCGAT TTCTAGCGCC GAAGCTTTGG
CATCCGGAAT ATGTGAATAA CACTTCTTCT CCGCCTCGTT ACCGCCTCGC CCCGTACGAG
GAAGCATCAC CCGACGGATT GTTCACTAGA TTTATTTGTC GTTTCCATGC CATCGATTTT
TCATCAGGCC ACCCGAGAAC TGTCACTTTA GGCGAAACCC TAAGCGAATA CCCTTTCAAC
TACGAAATGG CTGCCTACCG CAAAGGCTGG TATCGACTCT TGACGCCAAA AGGCAAGGAT
AGTCGATTTT TTTGGACAAG CAACCTTCGT TTTGATTGTC CTCTCCCTTT AAACGCCACC
TCAATACACC GAATGATTTC TAGTGGAAAC TCAATCCTTA GCGACGGCAC CCCGACTGTA
CACCTTGATT TAGTTCCTAT TCGATCCAGT GTGCGGTACA ATGAGCATTA CTTGACTGAA
GACATGATTG GACCGAAAGA AAGATGGGCC GCGAAGGGAT TCGATCCTGG AAAGCATTGG
GGCAAACAAA GTGTGCTCCC ACGAATAGAG GCGAGTGGAA GATGGGAAAA CATTCCAATC
TGCCATCCAC CAACACCCAA CGGAGGCGAT GTTGACAAAA AGTCTTACGA GACACATCCG
ATCTTAGAAT CACCTTCAAA ACCATCGAAG CCAAACTTTC TGTCGGCGTG TCTTTGGGCG
TCAGCAGAGT TCAAAACAAG AGGCGTAAAA AAAGGAGCCG ACACAGATAC TATTTCGCGT
CTGAAGGAAT GGATAGAATT TCACTTGATG GTGGGTTTCG ATCACATTTA TGTTTATGAC
AATACCGGGG CCCATACGAA TGCTACCTCA TTGGAGTCGA GCCTTGCTAA GTTTCCGGGC
AGGGTGACAC GGATTGATTG GCCGAGTATC GTTTGCAACA ACAATATACC AGCTCATGAC
TCAACAGGAG AACGTTCCAG TCAGTATGCT GCCGAAAATA GCTGCCGAAC TCGATATGCC
CCATTTACCG AGTGGATTGC AGCCTTTGAC ACGGACGAGT ACTTCGTGCC GATGGGAAAT
TATACCAATT TAAAAGATGT CTTGCTGAAT GCTGGAGCTC AGGGTACCAA CATACTTTCC
TTTCGGAGCT CGCGCGGCTA CCTTCGCCAA GAACACAGTG TCAGTGTTGA CGACGGAAGG
GCCCTGGAAA AGTCCGAGAA TAAGACATTT TTGGAAGCTT ATAACTGCGA CTCTGCTGGT
AGTCCCAAGC CGTCCTGGGC TGAACGCGCG AGAAAACAGA TTTACCGAGC AGACTACGTT
CCGTATCATT TTGTGCATTA CTCGACCGTT ACGAAAGGGC TACTAAAGGA GTACAAGGAC
CAGATCAACG GTACATGGTC AAGCAAGTTT GGAGAAAGAG CTCCATCGGA GCGAGTTACA
GATGAGTTGC ACGAAGCTGT CATGGTACAC ACAAAGACTA TCAAGCGCGA CATGACCAAT
CGTTACAAAA GACGATGTCG CTTTGACTAC GACAAGAAAT GGCAAGGTTG CACGGTTGCG
TATCCTTGGC CAAACGGTTC CGTAGGGAGT GGCAAGGAAA CTTATGATGA AAACGGAATG
GAGTACAACT GTTTTGTGAA CAGAAAAGTT GACGATCATT GGGTTCCCAA ACTTCGTGAA
GCGATTCTTC ATCGTCGACT GGCACAGAAC AGCTGA
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| Protein sequence | MVSGKWSNHQ TRLRRKRPFP SYTSCLAFST ISVTAVAFCV IYLLFHTVAL HVLSNLGRES
DHVFAALQHQ SLLREEVVAT GAALLSVPDY PALPKKSDIT VTDWHQKFVT VGTEQSGVFN
AVTIDTKRAE SFLITHGAQA IRKPLSAYLE PGLNDIVPGT GSRGDHKNPK DLGVAPEIYT
PLPLRTHTPD ALRKVEYPRV QTCHDMPGKF PIDRGLELDK DGLPIVWNVG DTLTPDDFPE
QEVPFCPVEA DPYLPWIHDV FPSPDGTRVH FIAQNRRRCR TGKNFSREVK RLAPQVALMQ
SVSVERIDEV RARFLAPKLW HPEYVNNTSS PPRYRLAPYE EASPDGLFTR FICRFHAIDF
SSGHPRTVTL GETLSEYPFN YEMAAYRKGW YRLLTPKGKD SRFFWTSNLR FDCPLPLNAT
SIHRMISSGN SILSDGTPTV HLDLVPIRSS VRYNEHYLTE DMIGPKERWA AKGFDPGKHW
GKQSVLPRIE ASGRWENIPI CHPPTPNGGD VDKKSYETHP ILESPSKPSK PNFLSACLWA
SAEFKTRGVK KGADTDTISR LKEWIEFHLM VGFDHIYVYD NTGAHTNATS LESSLAKFPG
RVTRIDWPSI VCNNNIPAHD STGERSSQYA AENSCRTRYA PFTEWIAAFD TDEYFVPMGN
YTNLKDVLLN AGAQGTNILS FRSSRGYLRQ EHSVSVDDGR ALEKSENKTF LEAYNCDSAG
SPKPSWAERA RKQIYRADYV PYHFVHYSTV TKGLLKEYKD QINGTWSSKF GERAPSERVT
DELHEAVMVH TKTIKRDMTN RYKRRCRFDY DKKWQGCTVA YPWPNGSVGS GKETYDENGM
EYNCFVNRKV DDHWVPKLRE AILHRRLAQN S
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