Gene PHATR_44221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_44221 
Symbol 
ID7203935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp1345826 
End bp1347088 
Gene Length1263 bp 
Protein Length249 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186512 
Protein GI219113857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGGC AAATCTTGCC CTACGTATTC CTTTGTTGTG GAATCCCTCA GGTGGCTTCC 
CTTTCTCTGT CAGACACGAA ACATCCAGCA CCAAGTGTTG CCAGAAATCC CTCGCAAATC
AGACCGTTTT CGACGGAAGA CTCTCCGGCG AGACGTCCAA GTCTCAGGGC TGAAAAACGT
CGCCTCCAGC GGAAACAAAC GACCTCGCTC AATTCTTCCC AACAGCGCCG GAAAGAATCG
CTCAGAGTCG GCAACAATCC ACTCTTGTCA CTTAATCTCA ATCTGGACGC CCTGGCTCGT
GCCCAGGCGG CGGATCGGGC TCAGGAGCTT TACCAGCGCA TCGCTGCCCT CCACGAAGAA
GGATACTACG CCGTTGCGCC CGATACGGTC AGTTTCAATT CTGTTCTCAA AGCTTGGCAG
AACGACGTGC ACGGCGCCCT GAAGTTCTGG GAATCCCAAT TTTCGCCACA GGGAACGCCT
TTCGCGTCGC AAGGGACGTC CTCACACACA ACAATGCAAC CGAACACACG ATCGTACAAT
ATTTTGCTAT TGGCCTTGGC CAAGGCGGGA CGGGCGGCCC ACGCGGAAAT CGTGCTGCGC
TACATGCAGG AACCCGACCC GGTCTTCATT CTTCCCGATA CCGTCACTTA CAATACCGTA
CTCCTGGCGT ACGCCGTGAC GGGTTGTCTT GCACTCGAAT CAGATACCGC CGTACGGGCC
GAATGTTTGC TGCAGGAGAT GATTAATTAA CGTACTTGGC CCCCGACGCG GTTTCATATA
ATACAGTCAT TGCTGCTTGG GCTGCTGCCC ATCCCAACCG ACACGGTGCG GAACAAGCGG
AACGTTGGTT GCGACGCATG ACCAATGATG TCTCGATCGC CAAATCCACG ACGATAGAAC
CGGATGTTTA TACGTATACA ACCGTAATTC AAGCATGGGC GCGTGTGGGG GACGTCTCCC
GAGCACAAGC TCTGCTGGAC GAAATGCCCG TACGGGGACT ACATCCCAAC CGCATCACCT
ATACTGCTTT GCTACAAGCA TACTGTGCCC AGGGTCAAGT AGATCAAGCT GAACAAGTTC
TAGAAATCAT GAAATTGAGT ACTCACATTG GTGCCTTGAC GCGACCCGAC AATGTGGCGT
ATTCCGTCTT GCTGGATGGG TGGGCCACCG TGGCGGATCG TCGACCAGAA GAAACCGTCA
CCGCCGTGAC GCGCCTATTG GAGGAGATGC AGCACTCGTC GCGGTTGTCA TTGGATTGGC
CCG
 
Protein sequence
MKRQILPYVF LCCGIPQVAS LSLSDTKHPA PSVARNPSQI RPFSTEDSPA RRPSLRAEKR 
RLQRKQTTSL NSSQQRRKES LRVGNNPLLS LNLNLDALAR AQAADRAQEL YQRIAALHEE
GYYAVAPDTV SFNSVLKAWQ NDVHGALKFW ESQFSPQGTP FASQGTSSHT TMQPNTRSYN
ILLLALAKAG RAAHAEIVLR YMQEPDPVFI LPDTVTYNTV LLAYAVTGCL ALESDTAVRA
ECLLQEMIN