Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_44221 |
Symbol | |
ID | 7203935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 1345826 |
End bp | 1347088 |
Gene Length | 1263 bp |
Protein Length | 249 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186512 |
Protein GI | 219113857 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGGC AAATCTTGCC CTACGTATTC CTTTGTTGTG GAATCCCTCA GGTGGCTTCC CTTTCTCTGT CAGACACGAA ACATCCAGCA CCAAGTGTTG CCAGAAATCC CTCGCAAATC AGACCGTTTT CGACGGAAGA CTCTCCGGCG AGACGTCCAA GTCTCAGGGC TGAAAAACGT CGCCTCCAGC GGAAACAAAC GACCTCGCTC AATTCTTCCC AACAGCGCCG GAAAGAATCG CTCAGAGTCG GCAACAATCC ACTCTTGTCA CTTAATCTCA ATCTGGACGC CCTGGCTCGT GCCCAGGCGG CGGATCGGGC TCAGGAGCTT TACCAGCGCA TCGCTGCCCT CCACGAAGAA GGATACTACG CCGTTGCGCC CGATACGGTC AGTTTCAATT CTGTTCTCAA AGCTTGGCAG AACGACGTGC ACGGCGCCCT GAAGTTCTGG GAATCCCAAT TTTCGCCACA GGGAACGCCT TTCGCGTCGC AAGGGACGTC CTCACACACA ACAATGCAAC CGAACACACG ATCGTACAAT ATTTTGCTAT TGGCCTTGGC CAAGGCGGGA CGGGCGGCCC ACGCGGAAAT CGTGCTGCGC TACATGCAGG AACCCGACCC GGTCTTCATT CTTCCCGATA CCGTCACTTA CAATACCGTA CTCCTGGCGT ACGCCGTGAC GGGTTGTCTT GCACTCGAAT CAGATACCGC CGTACGGGCC GAATGTTTGC TGCAGGAGAT GATTAATTAA CGTACTTGGC CCCCGACGCG GTTTCATATA ATACAGTCAT TGCTGCTTGG GCTGCTGCCC ATCCCAACCG ACACGGTGCG GAACAAGCGG AACGTTGGTT GCGACGCATG ACCAATGATG TCTCGATCGC CAAATCCACG ACGATAGAAC CGGATGTTTA TACGTATACA ACCGTAATTC AAGCATGGGC GCGTGTGGGG GACGTCTCCC GAGCACAAGC TCTGCTGGAC GAAATGCCCG TACGGGGACT ACATCCCAAC CGCATCACCT ATACTGCTTT GCTACAAGCA TACTGTGCCC AGGGTCAAGT AGATCAAGCT GAACAAGTTC TAGAAATCAT GAAATTGAGT ACTCACATTG GTGCCTTGAC GCGACCCGAC AATGTGGCGT ATTCCGTCTT GCTGGATGGG TGGGCCACCG TGGCGGATCG TCGACCAGAA GAAACCGTCA CCGCCGTGAC GCGCCTATTG GAGGAGATGC AGCACTCGTC GCGGTTGTCA TTGGATTGGC CCG
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Protein sequence | MKRQILPYVF LCCGIPQVAS LSLSDTKHPA PSVARNPSQI RPFSTEDSPA RRPSLRAEKR RLQRKQTTSL NSSQQRRKES LRVGNNPLLS LNLNLDALAR AQAADRAQEL YQRIAALHEE GYYAVAPDTV SFNSVLKAWQ NDVHGALKFW ESQFSPQGTP FASQGTSSHT TMQPNTRSYN ILLLALAKAG RAAHAEIVLR YMQEPDPVFI LPDTVTYNTV LLAYAVTGCL ALESDTAVRA ECLLQEMIN
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