Gene PHATR_44203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_44203 
Symbol 
ID7204117 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp1300825 
End bp1302882 
Gene Length2058 bp 
Protein Length658 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186501 
Protein GI219113835 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTCGA CAGCACTCTG CAACATGCGA CTGTTATATT TTACCGGACT ACTATTTGGA 
CCGACAGTAT TGACAGTGAA TGCCGAATGG CTGAAAATCA ATGACACAGT CAACACTATT
ACATCCCATC AAGACTTCCG AACGACAATT TTTCGCTCCT TCGATCATGT TGTTTGTCGT
ATTTTAGTGG AGCTTGTTGA CTACGATGTG GATCAAAAAG ATTCCATGCA AAATACGTGT
GAAGTTATCG GCCCGCCTGA GCTTCTTGGG AGCAGCCGAT GGCGTGGGGG CGGCAGTCCT
GGGCTTGTCA TTGAGCTAGA AGAGAAGCTG TGGGAACAAT TTAGTTTTGC TCCCGAGGAT
TTGGTCCTGG ATTTGATGGA TGCAGTAGTT GGCGAAAGAT ACTTCTCAAA CGTTGGCTGG
CTCCCTACCA GTATTTCGTT GTCAAGTCGT GGCAATGCGA CTATTCATCA CGGAGCGTTT
CATCGACGGA GGCAGCTGGA GTACTTTGAT CGCCCACGTT CAGTCATGCT CGTGAGGGTG
AGTACAGATG ACGAAAGCGT GAGTCTATCT CCATCGGAGA TTGCAGATTC GTTCTTCCAA
CCCGGTCGCT TTTCTTTTGC TTCACAATAC GAGGCGTGTT CTGCGGGACA GGCTCGGTTT
GTGCCATTCG ACGTCGATAA CGTAGTAAAG GAGGTTCGTG TATCTGGAAT CAGCAGTGCC
TTCACTGGCA GGAGTCTGCT TGTAGCGGCA AACATAGCGA CTCAAACGTT ACTTGGCGTT
GAGAGTTTAC CAGACGTAGC GGATCATGTC GTATTTTGCA TGCCGCCTGG AACGAGTGGA
GAAAAATATC TGGCCGCTGC TGCTCTCAAT AGTTGGTATG CCGTAGCCAG CGACAGGTGG
TGTGCGCAGC CGAACGCAAT CATCCATGAG GTATGTATTC CCAAGCTTAA TACTTGAATG
AATGTTTGTG ATGCTTTCGT ATCTGACACT TTTCTTTTTG CTCCATGGAA GATCGGCCAC
AATTTGGGAT TAGGTCATGC GGGAAAGGGC GACAATGCCT ATGCCGACGG GACTAGCCTA
ATGGGGTATT CGGAGGTTCG CGCTGATGGC CCGTCCAAAT GCTTCAACGG ATACAATTTT
TGGCTACTAG GTTGGTATCC GAATCACAGA ATCGATCTTG ACGCGTTGGC CTTAACGGAA
TCGGTTCGAG TAGAGATTGC TGCATTTACG GATTTCGGTG TCATCGGTAA AAACGAAGTA
ATTATTGCCA AAGCTGGCGG CCTTTATTTG ACCTACAATC GCGCCGAAAC GTTCAACAGG
GAAACAGAAG ACTTCCTCGA CACGGTAACG ATTACGAAGC GCGTCGATGG AATACACACG
AAACTATTGG CTGGCCTTAG CGAGACCAAC TCCCGGTATA TTTCTGGCGA CAAATTGATT
TTCGAGGTAT GCAGCAAACA TGACGGAGGA AGTGTAGCAG CCGATAAGTT TGTCATTGGT
ATCGGCAAAG AGATGCTCCC ATGCAAGTCT GCTATGATAT TGGGCCCAGA TGGAGTCGAC
GCAACTTTGT CACCTCCTAC AAGAGCTCCA TCTATGACAC CGACGTTAGC ACCAATATCA
ACACCGACAT CAGCACCAAT ATCAACACCG ACATCAGCAC CAACGTTCGC ACCAGCACCA
ACGGGAAAAC CCGTGACTCC GCAACCATCG CTGCATGAAT ATACAGGTTT CCCAACACTA
TCTACTGGCG GACCGTCTGA GCCCTTAGAC GACATCTCAG AGCCCTTTAA CCCGGAAAGG
TCTCAAGTGC CTGTCGGAGG AGACGAGAGG GTAGCCGCGG AAGAAAGCGA CCGATTCCCT
CTTATACCCG TGGTGTCTGG TATAGCTTGT GTCATTTTCT TTGTTTTCTT GACTATTTTC
CTCATTCTGC TGCGCAGGAA GTGGTCGAGA CAGGCCCGCA GTCGGTGGCA GGTTTCAGTA
TTAGGTAGTC CAAAAAAGCA ACACACTGAC AATGAATCTG AAACTTCGCA ATTTGGCCCT
TCCGATGAAT CATGCTGA
 
Protein sequence
MASTALCNMR LLYFTGLLFG PTVLTVNAEW LKINDTVNTI TSHQDFRTTI FRSFDHVVCR 
ILVELVDYDV DQKDSMQNTC EVIGPPELLG SSRWRGGGSP GLVIELEEKL WEQFSFAPED
LVLDLMDAVV GERYFSNVGW LPTSISLSSR GNATIHHGAF HRRRQLEYFD RPRSVMLVRV
STDDESVSLS PSEIADSFFQ PGRFSFASQY EACSAGQARF VPFDVDNVVK EVRVSGISSA
FTGRSLLVAA NIATQTLLGV ESLPDVADHV VFCMPPGTSG EKYLAAAALN SWYAVASDRW
CAQPNAIIHE IGHNLGLGHA GKGDNAYADG TSLMGYSEVR ADGPSKCFNG YNFWLLGWYP
NHRIDLDALA LTESVRVEIA AFTDFGVIGK NEVIIAKAGG LYLTYNRAET FNRETEDFLD
TVTITKRVDG IHTKLLAGLS ETNSRYISGD KLIFEVCSKH DGGSVAADKF VIGIGKEMLP
CKSAMILGPD GVDATLSPPT RAPSMTPTLA PISTPTSAPI STPTSAPTFA PAPTGKPVTP
QPSLHEYTGF PTLSTGGPSE PLDDISEPFN PERSQVPVGG DERVAAEESD RFPLIPVVSG
IACVIFFVFL TIFLILLRRK WSRQARSRWQ VSVLGSPKKQ HTDNESETSQ FGPSDESC