| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_44192 |
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| Symbol | |
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| ID | 7204107 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | - |
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| Start bp | 1247674 |
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| End bp | 1255832 |
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| Gene Length | 8159 bp |
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| Protein Length | 1365 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002186495 |
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| Protein GI | 219113823 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAAAAACTAC GGCTTTCACA AGAAAAGAGA TTGCAAAAAT ATTATTCGCA GATTGGAGCT
ATCGAAGCAA CACTTCATAC CACTGTACAA GTCTCGAAAA AGGGATGAGC TCTTCGTTCT
ATAAGATTTA CGAGTCGGTA AGTTACACCA TTGACCGTAG GCCTTGGACT GTCATTATCC
GTGTCTCCAT GCCTCACTCA AGACCTGTTG TTGACTTTCG ATATACGTAC CAATTTAGGC
GTCGGCCGCA GAAGTCATGA GCAAGACTCC TCGCTTCAGT CATAGTCGAG ATGTCTCCCT
TCTCGCTTCG AGCGAATCAG CCGAAGTCAA GGACTACGCC ATGGGTATGC TCTTTCTTGC
CGTCGTCATT CTGGCTGTCT TTATTCTTTG GTCCGCTCTC TTGATTCTAT TCTGGTGGCG
TGGGCAAGAG CGGTTCGGAT TCCTTGCAGG CGGGTCCTTC CTTGAAGAAA GCAACACCTC
CAACACTTCC AAACATGTGA ACGCCGACTC GAGCGACAAT TCCGAGAGCC AGGAATCGGC
TAAACTGAAC CTAGCTGCCG GCGCTAACAA GGAATCAAAT GACAATGAAG CGGAAGACGA
AGCCCTCTCC AAGGACTCCA AACTCGGTAA CAACCAAGAC ACAAGCGAAC TAGACGACAT
GTCTGACAAG GAGTACGCAA AAAACTCGCT CAATCAAAGC GAGACTGGTC CCGAGAGACT
CTCGCTATCG CTGCCAGAAG AAGCGTCGTC GGAAAATATC GAAAAAGACC AAGCGGACAC
TTATTGTCAC GAAGCAGGCG ATCTTCGTAC GCACAAGGTG GCTCGGATTT GCTTCATGGT
TGCGGGTGTT ATTTATATAA CATTCGCCCT TCTTTTGGCC ACCCTCGGGA TCATGCAACT
TCAACCTACA GTCGACGTAA TCAACGAAAC AGTTCTTGAC GTCGAAAGCA TTTCAAGTAT
GACACGGTCT ACAATTGATC GAGAGCTTCG TGGAACCATC GACTCGGCCA ATGTGATTCG
TAGTCGCATG GATTTTGAAG TAAGTCAAGA CCGCTTTTGT CCCGCCGACC CCGAGGTGAG
GGGTTCCGAA CTGGCGCAAG ATATTCTTAG CCAGTCACAA AATGCCATCA CTAAGCTGAA
TGATTTCTCG GCAAGCTCAT TGGATGATGC TGAGTCAGCT TTGAACACAA TCGATGACGG
AACTTCTAGT GTAAAGAAGA CAACAGAAGA TATTGACATT GCAGGTTGGA AAATCGCGAT
GGTGACGATC CCGTGTATTG CGATACCAGG AATACTCATG GCAGGATGTA TTCAAGCATG
GTTGGGTGTT GAGCGTCGGT TTCTTCAAAA TGCTGTGACC TGGTTTGTGT TTCCCGCACT
TGTTCTTTTG ACACTGACTG CCGTTATCGC GGCGGTTGGC ATGGGGATAG CCGCAACCGT
AAATGCCGAC TTTTGCTTAC CGGTACGTTT CTTGTGTACA TACCCTGTAA CGAAGAAGAT
CGCTTGGATG TCTCACTGAA GCGGCATGGC TATTGTTTCT CCTGCTATGA TCGCTCATGT
CTGTACAGGG TGGTTCCACA AACGATCCCC AAACGGTTAT CTTGAGAGTG TTGGAGGAAT
CTGATTACCA AAGCGGCGAA TACGTGTATC AAATGGTAGA ACACTTTGTC TCCCAATGCA
GAGACACAGT CAATCCTTTC GCCGACGTGG AGGGTGTCTT GCTTGATTTG GTACGTGAAG
AAATTGGTGC GAACAAAAGA CCTTTACCCA TGAGCGTCAG CTCATTTCCA AGTGTGTGTA
TGGTGTACTG GCAACTGACT AGTCCGATTT TTGCTCTCTT GGTTAGCCCT CGACTCAAAC
TGCTTTGGAA GAACTTGATG TCTCATTGAG AGAAGAAAAC ACCTTGGACG TCTTGGCGTT
GTCCTGTGAA CGCGATTTTA CAGTCCTTCT AGACCTCACT ACATCCATGC AGGAGGTCGT
CCAAGATATG ATTAAGCAGT TGTCTCAGGT TTTAGATACG CTCTCGTGTG AGGCGGTGGT
TCCGTTGTAC ACTAAAGCCG TGCACGAGGG TAGTTGTGAC CTTTCCGTTT CGGCATTGAC
TTGGATCTTT GTGAGCGCTC TCGTGATGGG TGTTACTGGA ATGATTATGA TCACTCTGCG
GGCGTCGTAC CGCACGACTG AGTATGTGCA CTCTAACGAC GGCACTTCTC GTGGTAGTCC
CGAGCTAGAT ACCCATAGTT CATGGCAAGG AAAGATCGCA GCCACTGGTA ATGAGGGTCC
CAATGAAGTT GACGAGCTCT TTGAACATCA GGAGCCTATG TTTCTCGACG AGGTCTCTGA
GACGGAGTAT CGCTAGTCAT TTGTCCAATC TTTCAATGTG TCGGATTCGA CTACAATGCG
GATGAGAATG TCAATTCAAT AAATTTGCCA ATCACTACCT TAGAATCAAA TTTTTAAGTT
CTCTTGGTAT GCATTTCTCT ATAGTGTCTT CGAAGTGTTG TGATGAATTT TGAGCAGCTT
ACTGCTATCC ATAAAGTCAT TCCTGTTCTC AATGTTGTAA TCGGAATCTT ACTCGATTCT
TAATCAAAGT CATAGCATCA TTCCCTTCGA ATATGGCATG ATTCTAGGTT GAGAGTGCGC
AGAAACTCAT CGCATACAGA TAACTGTAAA GCGCGATTTT ACTTTTAACC TTCCGACAAA
ATTTTCCCGT AGAATCTCTA GGTATCTGCT AGTGATGTGA AAATTATTCC AACCTTTCGA
ATTGATATAA ACCAGCACCG CTGTCTTCAT TCATTTTCAT TCTTTTGCTC TAGCTAGTTT
CGAATGCAAG CATGAGCTCT TCGTTCTATA AGATTTACGA GTCGGTAAGT TACTGCCTTA
CATTAGTCGA TAGCCTCATA CAATCACTTT CCGTGTCTAC ATGCCTCACT CAAGACCTGT
TGTTGACTTT CGATATACGT ACCAATTTAG GCGTCGGCCG CAGAAGTCAT GAGCAAGACT
CCTCGCTTCA GTCATAGTCG AGATGTCTCC CTTCTCGCTT CGAGCGAATC AGCCGAAGTC
AAGGACTACG CCATGGGTAT GCTCTTTCTT GCCGTCGTCA TTCTGGCTGT CTTTATTCTT
TGGTCTGCTC TCTTGATTCT ATTCTGGTGG CGTGGGCAAA AGCGGTTCGG ATTCCTTGCA
GGCGGGTCCT TCCTTGAAGA AAGCAACACC TCCAACACTT CCAAACATGT GAACGCCGAC
TCGAGCGACA ATTCCGAGAG CCAGGAATCG GCTAAACTGA ACCTAGCTGC CGGCGCTAAC
AAGGAATCAA ATGACAATGA AGCGGAAGAC GAAGCCCTCT CCAAGGACTC CAAACTCGGT
AACAACCAAG ACACAAGCGA ACTAGACGAC ATGTCTGACA AGGAGTACGC AAAAAACTCG
CTCAATCAAA GCGAGACTGG TCCCGAGAGA CTCTCGCTAT CGCTGCCAGA AGAAGCGTCG
TCGGAAAATA TCGAAAAAGA CCAAGCGGAC ACTTATTGTC ACGAAGCAGG CGATCTTCGT
ACGCACAAGG TGGCTCGGAT TTGCTTCATG GTTGCGGGTG TTATTTATAT AACATTCGCC
CTTCTTTTGG CCACCCTCGG GATCATGCAA CTTCAACCTA CAGTCGACGT AATCAACGAA
ACAGTTCTTG ACGTCGAAAG CATTTCAAGT ATGACACGGT CTACAATTGA TCGAGAGCTT
CGTGGAACCA TCGACCTGGC CAATGTGATT CGTAGTCGCA TGGATTTTGA AGTAAGTCAA
GACCGCTTTT GTCCCGCCGA CCCCGAGGTG AGGGGTTCCG AACTGGCGCA AGATATTCTT
AGCCAATCGC AGAGTGTTAT CGCCAATCTA TTCGAGTTTG ATGATTTTTC GTTGGGCTCG
TTAAATGATG CTGATTCTGC CTTGATCATC ATCGAGGAAG AAATTTCGAG CTTGAATTTT
GACATTACAG GTTGGAAAAT CGCGATGGTG ACGATCCCGT GTATTGCGAT ACCAGGAATA
CTCATGGCAG GATGTATTCT CGCATGGTTG GGTGTTGAGC GTCGGTTTCT TCAAAATGCT
GTGACCTGGT TTGTGTTTCC CGCACTTGTT CTTTTGACAC TGACTGCCGT TATCGCGGCG
GTTGGCATGG GGATAGCCGC AACCGTAAAT GCCGACTTTT GCTTACCGGT ACGTTTCTTG
TGTACATACC CTGTAACAAA GAAGATCGCT TGGATGTCTC ACTGAAGCGG CATGGCTGTT
ATTTCTCCTG CTATGATCGC TCATATCTGT ACAGGGTGGT TCCACAAATG ATCCCCAAAC
GGTTATCTTG AGAGTGTTGG AGGAATCTGA TTACCAAAGC GGCGAATACG TGTATCAAAT
GGTAGAACAC TTTGTCTCCC AATGCAGAGA CACAGTCAAT CCTTTCGCCG ACGTGGAGGG
TGTCTTGCTT GATTTGGTAC GTGAAGAAAC TGGTGCGAAC AAAAGACCTT TACCCACGAG
CGACAGCTCA TTTCCACTGT GTGTATTAAG TACTGGTAAC TGACTAGTCC GCTTTTTGCT
CTCTTGGTTA GCCCTCGACT CAAACTGCTT TGGAAGAACT TGATGTCTCA TTGAGAGAAG
AAAACACCTT GGACGTCTTG GCGTTGTCCT GTGAACGCGA TTTTACAGTT CTTCTAGACC
TCACTACCTC CATGCAGGAG GTCGTCCAAG ATATGATTAA GCAGTTGTCT CAGGTTTTAG
ATACGCTCTC GTGTGAGGCG GTGGTTCCGT TGTACACTAA AGCCGTGCAC GAGGGTAGTT
GTGACCTTTC CGTTTCGGCA TTGACTTGGA TCTTTGTGAG CGCTCTCGTG ATGGGTGTTA
CTGGAATGAT TATGATCACT CTGCGGGCGT CGTACCGCAC GACTGAGTAT GTGCACTCTA
ACGACGGCAC TTCTCGTGGT AGTCCCGAGC TAGATACCCA TAGTTCATGG CAAGGAAAGA
TCGCAGCCAC TGGTAATGAG GGTCCCAATG AAGCGGACGA GCTCTTTGAA CATCAGGAGC
CTATGTTTCT CGACGAGGTC TCTGAGACGG AGTATCGCTA GTCATTTGTC CAATCTTTCA
ATATATCGGA TACGACTGTA TAACGGACGA GAGTGTTACA ATACTTTGTT GTCAGTGGCT
TTCGACAAAA TGACAACGAA TTTCGTCCCG TGCAATACAA AGGTACGGAC AAAATAGACA
TGCCAATGAA TGCTTGTAGT TAGGTGCAGT TTACAACATT TCCATTCTCA TTGTCAAATT
TAGAATCTTC CAACAGTCGG TCAACAGCCA TTGTACGACC ACCCCCACTC ATAAATAACG
TTATTCGGAT GGAGAGTGAG CCGGCATTCA TCCCGAACAG GTCGAAGTGG GATTGCACGG
CATTCCTATT GGTATGTCAT TCCTTGCCAG AGCAGGTTAC TAACGACAGC TGAAAGTACA
TCTGGAGCAA TTGGAGAAAT CGTACAGAGA CTGTTCGAAT CTAAACGACT AGCGCGGTTG
CCATCTTTCC TTACTGTTGC TTGTAGATGG ATCGTAGTGC TAACACGAAG ATGAGCTCTT
CGTTCTATAA GATTTACGAG TCGGTAAGTT ACTGCCTTAC ATTAGTCGAT AGCCTCATAC
AATCACTTTC CGTGTCTACA TGCCTCACTC AAGACCTGTT GTTGACTTTC GATATACGTA
CCAATTTAGG CGTCGGCCGC AGAAGTCATG AGCAAGACTC CTCGCTTCAG TCATAGTCGA
GATGTCTCCC TTCTCGCTTC GAGCGAATCA GCCGAAGTCA AGGACTACGC CATGGGTATG
CTCTTTCTTG CCGTCGTCAT TCTGGCTGTC TTTATTCTTT GGTCTGCTCT CTTGATTCTA
TTCTGGTGGC GTGGGCAAAA GCGGTTCGGA TTCCTTGCAG GCGGGTCCTT CCTTGAAGAA
AGCAACACCT CCAACACTTC CAAACATGTG AACGCCGACT CGAGCGACAA TTCCGAGAGC
CAGGAATCGG CTAAACTGAA CCTAGCTGCC GGCGCTAACA AGGAATCAAA TGACAATGAA
GCGGAAGACG AAGCCCTCTC CAAGGACTCC AAACTCGGTA ACAACCAAGA CACAAGCGAA
CTAGACGACA TGCCTGACAA GGAGTACGCA AAAAACTCGC CCAACCAAAG CGAGACTGGT
CCCGAGAGAC TCTCGCTATC GCTGCCAGAA GAAGCGTCGT CGGAAAATAT CGAAAAAGAC
CAAGCGGACA CTTATTGTCA CGAAGCAGGC GATCTTCGTA CGCACAAGGT GGCTCGGATT
TGCTTCATGG TTGCGGGTGT TATTTATATA ACATTCGCCC TTCTTTTGGC CACCCTCGGG
ATCATGCAAC TTCAACCTAC AGTCGACGTA ATCAACGAAA CAGTTCTTGA CGTCGAAAAC
ATTTCAAGTA TGACACGGTC TACAATTGGC CGAGAGCTTC GTGGAACCAT CGACTCGGCC
AACGTGATTC GTAGTCGCAT GGATTTTAAT GTGAGCCCGA CGCAATTTTG CCCAGCCGAT
CCCGAGCTAA AAGGATCTGA ATTAGCACGG GATATCCTCA GGTACGCGCA GCCCATAATC
GCCAGGCTAT TTGAGTTTGG TGACTTTTCG TTGGCCTTAT TGGATGATGC CGAGTCGGCT
CTGATCATCC TTGATCGCGA AACTTCAACT ATCAATTTTG AAATAACCGG TTGGAAGACC
GCGCTGGTGA TCATTCCGTA CGTGACCATA CCGGGCATAC TCATGGCCGG ATGCATTCTC
ACCTGGTCTA TAATTCAGCG TCGATATTTT CAAAGTTTCA TTAGTTGCTT CGCCCTTCCT
GCATTTATTC TTTTAACACT GATTGCCATT ATCGCAGCGG TTGGTATGGG AATTGCCGCT
ACAATGAATG CCGACTTTTG TCTACCTGTA CGTTCCCAAA GTTTGCGCCG TGCACTTTCA
AGAAGTATAC ACATTCTCAC TGGAACGCCA TGGAACCTGT GTCTCTCGTC TCCGCTTGTT
CCTTTCTGTA CAGGGAGATA TCCCAGACAA TCCGCAAACT GTCATCTTGC GAGTAATGGA
GGAAATGAAC TACCAACGCG GCGAGTTCGT GTTTGATATG GTGCAATACT TTGTCTACCA
ATGCAGAGAC ACCGTCAACC CTTTTGCCGA CTTGGAGGCC GACTTTGCAA ATTTGGTAGG
TCGTGAAGCA ACTTCTGGAA GACGAGGCGA AACATAAGAA ATTTCCGTGC AAAAAGGGTT
CTGAATGCCC ACTAGGTTCT TCCCTACGTA CAATTTGCCC TGGACACTGT CGACTTATCT
TCTTTGTTGT TTTTTCCCCT TACTGTCAGC CCACAAGTCA AACCGAGGTG AAAAGCATTG
ACACATTGCT TAGCCAAGGG GACACCTTGG ACCTCTTGGC AGTATCTTGC GACAATGATT
TTACGATTCT CCAGGGCCTT GCTGTTTCCA TGCAGGTCAC CTTGCAAGAC ATGATTGAGC
AAATGGCTCA GGTCTTGGAT ACACTCTCGT GCGAAACAGT GGTCCCGCTG TACACCAACG
CCGTGTACGA GGCTTCTTGC AATACATCGG TTTCGGCATT GACCTGGATT TTTGTGAGCT
TGCTAGTAAT GGGAACTGCC GGAATGGTCA TGATTACGTT ACGTGCATCG GTTCGGGAGA
CCGAGTACGT GATTTCCAAC AAAGGTCCCT CCGGTGAGGA TGCAGAGCGA GATGCCGATG
TTTCGTGGTC AAGCAAGCTG GAACCTACTG ATAAAGCGGA TTTGAATGAA ACGGACGAGC
TTTTTGATGA TCAACAGCCA GAGTTTCTCG ACGAAATTAC CACGGCGACG TACGGTGCGC
GACAGATTTG CAACGAGGGC GACGTTGACG GGCACTTGGT TCGTTGAGAT GACAGTCACG
ACGACGGTTC GTTTCCGCGG CGCCGTTCCT AGGTAGAGAG GTCGAGAGGT CGAGAGGACC
GTTCGAGATG GCAACTTTCA TAGTTAGCTG GCGGGGAAGG TTCTTTTAGG AAACTTCGGT
TGCTGGGTAT CCCGATTCAG GGACTGACTG TGAGTTGCAG TGTCGTGTAC TACTCTAGAC
TAGTATAGGT AACTATGTAG TATGCGAGGC AACCAATAGT AGCAGTGCAG ACGTTCACC
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| Protein sequence | MSSSFYKIYE SASAAEVMSK TPRFSHSRDV SLLASSESAE VKDYAMGMLF LAVVILAVFI
LWSALLILFW WRGQERFGFL AGGSFLEESN TSNTSKHVNA DSSDNSESQE SAKLNLAAGA
NKESNDNEAE DEALSKDSKL GNNQDTSELD DMSDKEYAKN SLNQSETGPE RLSLSLPEEA
SSENIEKDQA DTYCHEAGDL RTHKVARICF MVAGVIYITF ALLLATLGIM QLQPTVDVIN
ETVLDVESIS SMTRSTIDRE LRGTIDSANV IRSRMDFEVS QDRFCPADPE VRGSELAQDI
LSQSQNAITK LNDFSASSLD DAESALNTID DGTSSVKKTT EDIDIAGWKI AMVTIPCIAI
PGILMAGCIQ AWLGVERRFL QNAVTWFVFP ALVLLTLTAV IAAVGMGIAA TVNADFCLPG
GSTNDPQTVI LRVLEESDYQ SGEYVYQMVE HFVSQCRDTV NPFADVEGVL LDLPSTQTAL
EELDVSLREE NTLDVLALSC ERDFTVLLDL TTSMQEVVQD MIKQLSQVLD TLSCEAVVPL
YTKAVHEGSC DLSVSALTWI FVSALVMGVT GMIMITLRAS YRTTEYVHSN DGTSRGSPEL
DTHSSWQGKI AATGNEGPNE ADELFEHQEP MFLDEVSETE YRYGFRQNDN EFRPVQYKES
SNSRSTAIVR PPPLINNVIR MESEPAFIPN RSKWDCTAFL LMDRSANTKM SSSFYKIYES
ASAAEVMSKT PRFSHSRDVS LLASSESAEV KDYAMGMLFL AVVILAVFIL WSALLILFWW
RGQKRFGFLA GGSFLEESNT SNTSKHVNAD SSDNSESQES AKLNLAAGAN KESNDNEAED
EALSKDSKLG NNQDTSELDD MPDKEYAKNS PNQSETGPER LSLSLPEEAS SENIEKDQAD
TYCHEAGDLR THKVARICFM VAGVIYITFA LLLATLGIMQ LQPTVDVINE TVLDVENISS
MTRSTIGREL RGTIDSANVI RSRMDFNVSP TQFCPADPEL KGSELARDIL RYAQPIIARL
FEFGDFSLAL LDDAESALII LDRETSTINF EITGWKTALV IIPYVTIPGI LMAGCILTWS
IIQRRYFQSF ISCFALPAFI LLTLIAIIAA VGMGIAATMN ADFCLPGDIP DNPQTVILRV
MEEMNYQRGE FVFDMVQYFV YQCRDTVNPF ADLEADFANL PTSQTEVKSI DTLLSQGDTL
DLLAVSCDND FTILQGLAVS MQVTLQDMIE QMAQVLDTLS CETVVPLYTN AVYEASCNTS
VSALTWIFVS LLVMGTAGMV MITLRASVRE TEYVISNKGP SGEDAERDAD VSWSSKLEPT
DKADLNETDE LFDDQQPEFL DEITTATYGA RQICNEGDVD GHLVR
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