Gene PHATR_44182 details

Gene Information

• Locus tag: PHATR_44182
• ID: 7204101
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 1221135
• End bp: 1223246
• Gene Length: 2112 bp
• Protein Length: 613 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002186490
• Protein GI: 219113813

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGATGA ACAAGTTCCC AACGCATTTA GAGTTGTTAA CAAGCGTTTC CGTTGAGATT 
TCGGCCTTTC GGGGAAATAC CTATTTATAT ATTCTATTCC CCTATTTTCT ATCAAACCGG 
ATGTTCCCGG CGCGCGTGAG GACTCGGCCC AAACCGGGTT GCTTCCCACG GAAACGAGGC 
CAACTGGAGG GCGGGGTTCC GGAGTCGGGC GGCAGGTCAC TGTCCTTCGA TAGAAACGGA 
ATGTGCAGAC GAGCGGACGA GCAGACGAAC CGAGCAACAA CAAGACAAGC ACAACCAAGT 
CGAGACCGCC CCGAACTATG GTACACACAG ACAGTCAACC AACATAGGAA ACGTGTCTCA 
CCCAAGGACT GTTTCGAAAC CGTACCCGAA ACCAAATCGA CTCCGACTTG CATTTTAGGC 
ATTCTGGGAG GTCCTTGGCA CGATTCTGTA CGGTGTGTGC TTGTGTGCTC AAGCAAATTG 
AAGGTTGATT GTCACCGGTC AACAATCACT CCCTTGCTTT CTTTCCAAGC ACCACGCCAG 
CGTACGGCCA ATACCGACGA TACACACACA CACGACACTC GGGGAATTCG GACGTAAAAT 
CGACGGTGAA CAAACTGCCC TCTCGGTTTG GACAGACTTG GAGCGTACGC AACTCGCGAC 
CCCGCACACC CCCCCCCGCC GCAAAAAACA GGGAAAATCA GTATGCCGGC ACGGCGACGA 
CCGAGCAAAA AAGCCTCTTC TTGTTTAGAC AATTACAACG ACGATCAACA GCGACGTATG 
GCGGCCCGAC CGGATGGGTC CCATAGACGA TGGAACAAAC GCAATATTGC CTACGGGGCG 
GCTCTGATTG CCACGTTGTT GATCGTTGCC GTCGTTCTCC TTGCGGTGCT CTTGCCCGAC 
ACGAATCACG ACAGCAACAC TGGTAGTACT ACTACTACGA CGACGACGAC TACCAACGAT 
GCTTCCACAG CTGCTCCGGT ACGTACCAAT CATACGGAAC ACGGTAGAGA CGACGACAAC 
AACGAACATA GTAATAACAA CAACAGCGGT GGCTTCCAAA TATCTTCGGT GCCGACGCAG 
CAATCCAGTG CCCAATCCTC TCAGGGGACG GCGGAACCTT TGTCCTCCGC GCCCTCCACA 
ACGACCCCCA CTGCCAGCCC CTCGCTGCGA CCGTCGGTGC GTCTTTCGGC CACAGCCAGG 
AACAAGCACT CGACCGGAAA CTACCGTGTC CATAACCAGC AAACACGGAC CATGTACTCA 
CTGCTTGTTT TTCTCTCTTT CCTTTTCGCC TACACTTGCA TACAGACAAA GCCGCCACCA 
CGACGGAACA TTACGACCAT GGGAACGTTC GAATTGTTGG AAACGGTTCC GCACGACGCC 
AACGCTTTTA CACAAGGTTT GCAATCGGTA CCGGATGATC GTACTACTAC CGCCAGCACG 
ACTAGTACGA CCAGCAAAAT GTACGAAAGT ACCGGATTGT ACGGAGCGTC GGACGTTCGG 
ATCGTTGACG TTGCCACGGG GGGAGTTCTA CTAAAGACGG AATTACAAAG TCAATTCTTC 
GGCGAAGGTC TTACCTACTA CGTCGACAGT CTCGCCCAAG AAGGGCGTTT GGTTCAATTG 
ACATGGAAAG AACAAACTGG CTTTGTCTAC GACCCTACCA CCTTGGTACA ACTCTCCAAC 
TTTACCTATA AAACTTCCAA CACGGAAGGA TGGGGCATTA CCTACCGGGC TGACCAAAAC 
ATTTTTTACG TCACGGACGG GTCGACCTTT GTCCACACCT GGAACGTGGA ATTTCAAGAA 
ATCGCCAAGG TGCCCGTGAC GATGCAAAAT ACGGCAACAT CCAACCCCTC TACACTCAAT 
CTCATCAACG AATTGGAATG GGATGTGAAT TCGCGGACCT TGCTCGCCAA TGTTTGGATG 
CAGGATGTGC TAATACGGAT TCAGCCCGAA ACGGGTTTTG TCACGACCGT GTACGATTTA 
ACCACGCTGT TTCTAAATCG ACCAAACAGT GCCGATGTCC TCAATGGGAT TGCCTTGACC 
GACGTACCCG ACGAATTGTG GGTCACGGGA AAGCTATGGC CTAATATGTA CCGCATTCGA 
CTCATTGGGT GA 

 

Protein sequence

MRMNKFPTHL ELLTSVSVEI SAFRGNTYLY ILFPYFLSNR MFPARVRTRP KPGCFPRKRG 
QLEGGVPESG GRSLSFDRNG MCRRADEQTN RATTRQAQPS RDRPELWYTQ TVNQHRKRVS 
PKDCFETVPE TKSTPTCILG ILGGPWHDSV RLGAYATRDP AHPPPPQKTG KISMPARRRP 
SKKASSCLDN YNDDQQRRMA ARPDGSHRRW NKRNIAYGAA LIATLLIVAV VLLAVLLPDT 
NHDSNTGSTT TTTTTTTNDA STAAPRWLPN IFGADAAIQC PILSGDGGTF VLRALHNDPH 
CQPLAATVAR NKHSTGNYRV HNQQTRTMYS LLVFLSFLFA YTCIQTKPPP RRNITTMGTF 
ELLETVPHDA NAFTQGLQSV PDDRTTTAST TSTTSKMYES TGLYGASDVR IVDVATGGVL 
LKTELQSQFF GEGLTYYVDS LAQEGRLVQL TWKEQTGFVY DPTTLVQLSN FTYKTSNTEG 
WGITYRADQN IFYVTDGSTF VHTWNVEFQE IAKVPVTMQN TATSNPSTLN LINELEWDVN 
SRTLLANVWM QDVLIRIQPE TGFVTTVYDL TTLFLNRPNS ADVLNGIALT DVPDELWVTG 
KLWPNMYRIR LIG