Gene PHATR_44149 details

Gene Information

• Locus tag: PHATR_44149
• ID: 7203854
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 1122943
• End bp: 1125265
• Gene Length: 2323 bp
• Protein Length: 459 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002186474
• Protein GI: 219113781

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.104122
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCCAT TCCGAATGCT TAAGGATGCT CCCCGGGAAC TAGAAGATGC GTCTTTCGGA 
GTCCAAATTA TTTATTATGA GGACTTTTAC TACGCGCTCG TTTTCCTTAC AGCAGTCTAC 
CTGTCCGGAC GTGTCGCCAG CCTTTTACGG ATGCCGGCCT TGACCGGGGA AATTGTTGCT 
GGCATTCTCT TGGGACCGCC ACTGGCTAAC TTTGCTCCCA TCCCTCAAGC GTGGGTGCTG 
CTCGGAGAAA TCGGGTAAGT GGTGGAAGGG ACAGATAGTT TGATCTTGCA AGTATCCATT 
ACCATACAGA CAGGCTAAGG CTCCGGATGG CAATAAGACT TATTTTGACA GTGCTCGAAG 
CTGCCATGGA CATTGACGTC AAGAATTTGA AAGTTATTGG AATACGCGGA TTTACAATCG 
CTGTAGTTGG ATCGATTTTA CCAATTTCAA TCGGAATTAG CTTGGCCTAC GGCATGGGGT 
TTGAAGGTAA GGCAGCAATT GGGGCTGGCG CAACGTTCGG GCCGACATCA ATGGGCATCG 
CGCTGAACGT TCTCAAGAAC GGTGGAATTT CATCAACACC CCTTGGTCAG CTGATTGTTT 
CGGCCGCAAT TGTAGACGAT ATGCTCGCAT TGGTGATTTT GAGTCAGCTC GAGGCCTTGA 
CCGGGGAGAT CACAGTGGTT GGTGTCGTTG TTCCGATTCT TTCGGCCTTC CTTTTTCTCT 
TGCTCGGGGG TTATATTGCG CTCTTTGTAT TACCGAATAT CAGAGAGAAA TATTTGATTA 
GCAAAATCCC ATCCGAACAT CGCGATGAGG CTCAACTCAT CATACTCTTC GGGATCCTTC 
TAGCAATGGT ACCAGCGACG TTTTACGCCC AAGCATCGTA TTTAATGGGA GGATTCGTCA 
CTGGTCTTGC CTTTTGTAGC GCAGAGGGAA CCCATCAGCT TTTCATTAGT CAGTTCAAGC 
GAGTAACAAC GTGGTGCATG CGAATGTTCT TCGCGGCAAG CATTGGCTTC CAAGTCCCCG 
TCAGGGATTT CGGAGACGTC CAGGTACTTT GGCGCGGAAT GGTATTTTTC TCGTCGCTGT 
TCGGAAAACT TGCGGTTGGG TTTCTCGTCC CGAATATGCA TGAAAGCCGC AACTTCACCG 
GCCCCCATCT TCGCGACTGC TTGATTACGG GTTTCAGCAT GGCGTCGGAA GGAGAGTTCG 
CCTTCGTTAT CGCGGTGTTT GCCGTCGATA ACGGTCTAAC CGATCGTGGA TTGTACGCCA 
GTGTCGTATT GGCAGTCCTC CTGAGTGAGA TTATTCCTCC GTTCCTTTTG CGATACACGA 
TTGCCAAGTA TGAAGTTTCA AAAACAGAAC CAACGACTCG ACATCGTAGC GATGTCGAAT 
CAGAGAACCC ATTGGAAACT TTGTCGAATT CTGAGTACAA TCATAGTCAG GGACAATAAG 
TCCTACAGCA GCCGTGACTG CTACATCGGT AATGCATACA TCCAGCAAAA CTTCGAGTCG 
ACAGCGATTT TGGTTTGGGA ATGAATGATG TTCCAGATGG GGTCCTTCAT CGAACAATTA 
TAATCTTGTA CTTTTGTGTG AATAGAACTA TGTGTCCGTG TTACTAGCCT TTTAAGCTGC 
AGTTCCAAAC AAAAAGTTCG CTTCAAACCA TGCGGAATCA AAATGGCGAG CGGAACTTCA 
AAATAGGAGG AAACTTCGAT AATATGGCGC CTTCCAAAAC TTGTCGTTCT TGTGACAAAC 
ATCTTTGCCG TATCGCAGTG TCTTTTTCGT CTCGACAAAA TTAGCCTCGG TGTTAGCTCA 
ATCTAGTATC GGATCTTCCT CGTCATCTCC CTTTGACTTT GATGAAAGTC CCAGCCACTG 
CGACATTTTC TCAAACTCCG CAAGAGTCGC CACCGTAGTT GTGCCTGCGA TACCACCGAC 
GGCAAGAACA AGTCCTCGCA ACCTTGCGGC CATTTTGGAT GCCGCTTCGA ACGGATTTAT 
CCCCTTATTG AAAAAACGGG TAGCATTTGC GAGAACACTT TGATCACACA ATTTTTCCTG 
CAACTCGGTA ATTCGAAAAT AGGAAGCCTC CACAAAAACC TCACTCAAAA CTTTGTGGTC 
CTCCGGAAGC TGCACATAAT TTTGGGTATT CTTGCGCAGA CTCACGGTCG TTCTGCCGTA 
GGACAGCAGT TCGACGCGGT TCCTCAGGTA CTGCAGAATA AAGCCGAAAT GTGAAGGATC 
GCGGTCAATG AACACTGCTC CGTTGCGTAC AATTTCCTGG TTGGCTTCCG CCCTTGCCAC 
GTGATCGGCC AACACCGGAT TTTCGGCCAC GGTCGACCGC AAC 

 

Protein sequence

MMPFRMLKDA PRELEDASFG VQIIYYEDFY YALVFLTAVY LSGRVASLLR MPALTGEIVA 
GILLGPPLAN FAPIPQAWVL LGEIGLRLRM AIRLILTVLE AAMDIDVKNL KVIGIRGFTI 
AVVGSILPIS IGISLAYGMG FEGKAAIGAG ATFGPTSMGI ALNVLKNGGI SSTPLGQLIV 
SAAIVDDMLA LVILSQLEAL TGEITVVGVV VPILSAFLFL LLGGYIALFV LPNIREKYLI 
SKIPSEHRDE AQLIILFGIL LAMVPATFYA QASYLMGGFV TGLAFCSAEG THQLFISQFK 
RVTTWCMRMF FAASIGFQVP VRDFGDVQVL WRGMVFFSSL FGKLAVGFLV PNMHESRNFT 
GPHLRDCLIT GFSMASEGEF AFVIAVFAVD NGLTDRGLYA SVVLAVLLSE IIPPFLLRYT 
IAKYEVSKTE PTTRHRSDVE SENPLETLSN SEYNHSQGQ