Gene PHATR_44131 details

Gene Information

• Locus tag: PHATR_44131
• ID: 7203884
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 1069140
• End bp: 1072563
• Gene Length: 3424 bp
• Protein Length: 1111 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002186461
• Protein GI: 219113755

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0847147
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATCCA ATAATACAAG CAACACAACG ATCCATTTGA TTGGGACTAG CGCGACTATA 
CTCAATACAG AGAACTCGGA GTGCGGAGCC TGTTACGGTG TTGCGGCGGT CTCAGCTTGG 
GCTCGCAATG TTGTCTCCGA AAGCCCCGTT ATAGTACTGC CCCTCCTGGA TCGGTACACA 
CAGTTTGTAG AGATGCATCC ACTTAAATTG AGTGTGAATA CGCATGTGTT CAACGTTCTT 
TTGGGGTGGG GCGTTTTCCT ATCGAAAGCT TCTCTTCTAT CGCTTGACGC TACACAGAGT 
GGCATTCGAA GTTTGCAATC AAGAAGCATG CCGCTGCTGT TGACAAATGC GATTGTATCT 
CCCATAAGCT CATGGCACGA ATATTCAAGG GCAGTTCATC TTGACGCGGA AACAAAACTT 
GCCGTCCTGT CAATTGTGCC GGCCTCAGCG GAATCTTCTT CGCGTGTGGA TTCAATTTCT 
TCGGTCTTGG GCATTCTCCG CTACGTTGCG AAGCTTAGTC GCGAGTCGGG TTGCAACCCG 
TCCACGAGCT TGTATGACTC GTACTTGGAC CGCAGCCATG TCGCTATGGA AGCACCGTCT 
TGTTGGATTC CGGTTGTCTG GTATTGCGAT CCAGACCCAG CTCATTTTGA ATTTTTCTTA 
CAAACAGTTA CGGAAAGCGA ATACGCTCCT GCTGCTATTG TGGATACTGA GAGCAACAGT 
GCCGGGTTTT TATCTCCGCG GCAATACGGA AGCAAAGGTA CCTGGGTATT AAGTTATAAG 
GCTGACCCCC AGCTTTTCAC GCTTCACAGC TTCGTCCTCG ATGAAGACCG GAAAACTATA 
TTGAATTTTA CAACCCAGAA CGAAAACATT TTGGATCTTC CCGAAAATTT CAGAGACGAG 
ATTTACCTGA AGCATGTAAC CGATTTGGAA GACCTTGCTG CACAAGCCAT CGCGAATAAT 
CCTATCCTGG GAAGTAGTAC ATCCATGCCG GCCCCAGTTG AAGGAGACTT TTATCGATGT 
ATAGTTGGAG AATGTGAATT AGGTAATCTA TTTTCAGACG CACTTCGCTG GTACACAGGA 
GCTGATGTCG CTTTTCTCGC AGGTGATGGT TTCCGTGGAT CGGGCTGGCC GGAGGGATTT 
GTTCGGGTGT CCGACCTTTG GGAGGCTTCC CGTTTCCCGT ACACGGAATG TACTGGAACG 
ATGAGCGGTA TCTCCTTGTT TCAATTGTTA AATTATTCGA CCAGTTCGGC GTCACTGAAT 
GGGTTCAACA TCGACGGAGG TGAATTTCTT CAGACTTCGG GTATGCGTGT CACTTATAAT 
CCACAGTTGT CTGGGTCTCG CCTGATTGCT ATCGAAGTCT GGGACCAAAA TGTAGCTAGA 
TACGAGCCAC TGGAACGGCT GCGTATGTAC CGATTTGCCA CCGATAGTAA CCTTTGCCAG 
AAAAAGAATC CTTTCCCTAA TTTCCTCGGT CCGAATTTTG CTGTAGAAGG TGAGATTCAG 
GGCGCAGTGG GAGATGAGTC GCAGCAAAAC ATTGTTGGTC AATACCTGGC GCAGCTCGAT 
TTACCATACG AAGCGTCCCT TTTTAATCGC TTGCGCAATA ATGTGTCCTC ACTGAAGACT 
TTGAATCTGG TTCAAGTTGC CGAGGAATGC CCCACTGGAA CGTATTGGAT TACTGAGAGA 
CAAACATGTT TTGACTGCCC GGACTCGACT CGTGTTGCTT TTTCGGAAAA AGAATTTCAA 
TACCAAATTC CTCATAGCAT GAATGTACCG TTGGAAAGTC GAGTCCTATT ACTAAATGAA 
GCGCCCTTTG CAGTTTCTGT TGGACCAAGT TCGATACCAT CGTGGGTTTC TTTCACGAGG 
TTCTACTTGA ACTCAACGAT TCCGATTGAT CCTCCGTCGA ATGGAAAAAG GGCAGTTTTG 
CAGTCTGGCG GGTCTCTTAC AATCGACTTT ACGGTTAGAT CCCGGGGGTT GTCGTCAGGG 
ACGGCGTTGG GTACAGTGTC TTTTGGAGTA CACGTTGGAG GTGCCTATCC CGGGTGCGAC 
GGCCAAGAAG CGACCTTTGA CATTTTGATT CGTGTAGCAC CACCCCTGGA GCTCAATCAG 
CTAGGAAATA TCAGGTACAT CGGATTAGGG CTGTCCGCTA TCATCTTGTT TACGGCAGCT 
GGATTTGCGC TTTGGGTTAG ACGCTCTCGC GAGACGCGTA TTGTCAAGAC TATGCAACCG 
TTGTTCCTTG TCACAATTTG CTGTGGTGTT TTTGTTTTGG GAGCCGTTCT CGTTCCACTC 
AGTATTGACG ACGAGATAGT TTCAAACCAG GGGTGCGACA TTGCATGCAT CTCGATGCCG 
TGGCTCGCTA GTATTGGATT CACGGTAACG TTTTCTGCTT TGTTTTCGAA GCTGTGGCGA 
ATCAACAAGC TGTTTCAATG CCAACACTTT CGCCGCACCA AAGTCGAAGA AAAGGATGTT 
CTTGCACCAT TCGCCGTCCT TTTTACGCTT AATCTTACGA TTCTCGTATC TTGGACCGTT 
GTTGATCCTC TAAAGTGGAG CCGAGCGCCC GTTAATGGAG AGTTTTGGAA CACGCATGGC 
GAGTGCAGTG GTTCGAGTAA AACGACAACC ACACTTTTCT TGGTTCTTAT TTGCTTGGTG 
AACGCCGGTG CTTTTTCCCT AGCTTGTTGG CAAGCATACC GAGCTCGCAA AATTAGTGAT 
GAATTCAGCG AAAGCAAGAA TCTTGGCATG GCAATCTTCT GCTGGGCCCA GCTACTCGCT 
GTAGGTTGTC CCGTCCTATT CTTGATCAAC TCTAACGACC CGGTTGCACG CTTTTTCCTT 
TTGGCAGTCA TTTTGTTCGC TACCTGCATG TCCATGCTGA TGTTTATTTT TGTGCCCTTG 
ACTCTACAAA GCTGGCGTGA TAAACGCGAC GGTGGTCGCC GGCGAAGTTC GGTTCAGATT 
TCGGGTGTCA TGTCGGCAGG AATATCCGGT GTGTCACTGG TGTCCAGGTC GCACAGTTTG 
TCAGAAAAAA AGGCATCGTC ACAGGAAACC AAATCATCAA ATATGTCCGG TGTTACAGCT 
CCTGGCCCTT CGGCGATTCT TTGCAACAAC CGTATTCTGA AGGACGACCT GGAAATTGAC 
GTCGAAGCTG TTTCCAATCA CAACTCTTTC TCTCAACGCG CCTCCGTTGG AGATGACAAT 
GCCAGCATAG ATGAATCAGC TTGTGGGTTG GCAGACAGTG TCATTCCAGC GGTGGTCCAA 
GAGGCTTCTA TCAAAAGCGA CGCCAGCAAG TCTTTTGATG TCCAAGAATC TCTTTTGCTA 
TCAGAGAAAA AATTGCGCTT TGCTCCGGGA ATGTAGTAGC TCAAATTGTA CATTTTATCG 
TCCCCCACCT ATCTTCACAT CCAATTGAAA TTACTGTAAG TTACAGAACA AATTTGTTAG 
TTGC 

 

Protein sequence

MESNNTSNTT IHLIGTSATI LNTENSECGA CYGVAAVSAW ARNVVSESPV IVLPLLDRYT 
QFVEMHPLKL SVNTHVFNVL LGWGVFLSKA SLLSLDATQS GIRSLQSRSM PLLLTNAIVS 
PISSWHEYSR AVHLDAETKL AVLSIVPASA ESSSRVDSIS SVLGILRYVA KLSRESGCNP 
STSLYDSYLD RSHVAMEAPS CWIPVVWYCD PDPAHFEFFL QTVTESEYAP AAIVDTESNS 
AGFLSPRQYG SKGTWVLSYK ADPQLFTLHS FVLDEDRKTI LNFTTQNENI LDLPENFRDE 
IYLKHVTDLE DLAAQAIANN PILGSSTSMP APVEGDFYRC IVGECELGNL FSDALRWYTG 
ADVAFLAGDG FRGSGWPEGF VRVSDLWEAS RFPYTECTGT MSGISLFQLL NYSTSSASLN 
GFNIDGGEFL QTSGMRVTYN PQLSGSRLIA IEVWDQNVAR YEPLERLRMY RFATDSNLCQ 
KKNPFPNFLG PNFAVEGEIQ GAVGDESQQN IVGQYLAQLD LPYEASLFNR LRNNVSSLKT 
LNLVQVAEEC PTGTYWITER QTCFDCPDST RVAFSEKEFQ YQIPHSMNVP LESRVLLLNE 
APFAVSVGPS SIPSWVSFTR FYLNSTIPID PPSNGKRAVL QSGGSLTIDF TVRSRGLSSG 
TALGTVSFGV HVGGAYPGCD GQEATFDILI RVAPPLELNQ LGNIRYIGLG LSAIILFTAA 
GFALWVRRSR ETRIVKTMQP LFLVTICCGV FVLGAVLVPL SIDDEIVSNQ GCDIACISMP 
WLASIGFTVT FSALFSKLWR INKLFQCQHF RRTKVEEKDV LAPFAVLFTL NLTILVSWTV 
VDPLKWSRAP VNGEFWNTHG ECSGSSKTTT TLFLVLICLV NAGAFSLACW QAYRARKISD 
EFSESKNLGM AIFCWAQLLA VGCPVLFLIN SNDPVARFFL LAVILFATCM SMLMFIFVPL 
TLQSWRDKRD GGRRRSSVQI SGVMSAGISG VSLVSRSHSL SEKKASSQET KSSNMSGVTA 
PGPSAILCNN RILKDDLEID VEAVSNHNSF SQRASVGDDN ASIDESACGL ADSVIPAVVQ 
EASIKSDASK SFDVQESLLL SEKKLRFAPG M