| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_44117 |
|---|
| Symbol | |
|---|
| ID | 7203874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011671 |
|---|
| Strand | - |
|---|
| Start bp | 1027730 |
|---|
| End bp | 1029328 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase |
|---|
| Protein accession | XP_002186451 |
|---|
| Protein GI | 219113735 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.449308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGAT CATCTCTTAA TAGCGTCAGA GATACCGGCG GGGGGACATC TTCCAGCTTG
ATTGTTGCAG TCGTTGCGGG GCTGGTGTTG CTTCGCGTTT TGGTTGGATA CCACCCTCAC
TCGGGACAGG ACAATTACCA TGGCTTGCAC TCGGCCTATG GAGGAGACTT TGAGGCCCAG
CGGCATTGGA TGGAGCTCAC ACTTCATCTC CCGGTTGGAG AATGGTACTG GTACGATCTC
AGCTACTGGG GGTTGGACTA TCCTCCGATA TCAGCTTACG TTTCGTGGAT TTGTGGCTGG
CTTTCGCATC GGCTCGTCGG CCCGGAATCT GTAGCTTTAG AAACTTCTCG AGGTTTCGAA
AATCCGACGC ACAAGGCATT CATGCGGTCA ACGGTGATCG TGCTGGATCT TCTCGTTTAC
GGGACGGCTG TCTGGTTTTG GACAATGCAT CGCCAATACG ACCGCAATCT TCCCGACTCG
ACGCGATTGT GGAGATTTGC TCTCGCCATG TCGCAACCGG CAATTCTACT CATCGACCAC
GGCCACTTCC AATACAATAC AACAGCACTG GGACTATCAC TATGGGCATT TTATTTCATG
ACGTTGCCAG ACTTTTTTTA TTGCATGATT GGCTCATTCA TGTTTTGTGC AGCGCTTTCC
TTTAAACAAA TGACGCTCTA CTACGCCCCA GCCGTATTTT TTTACCTGCT TGGACGGTGT
TTCACAACCC GCGGTCGTTT CCTGGTACAG CGCTTCTATC TTTTAGGGAT GACCGTTGTT
GCTACGACAT TTGCCTTGTG GTGGCCCTTT GTTGCGTTTG GTCCGGAAGG CACATCTCAC
ATCGAAAGAG CTGCGCACGT CTTTCGGCGT ATTATTCCCT TACAACGGGG TCTGTTTGAA
GGCAAAGTGT CCAATCTGTG GTGTGTCCTC TCGCTCAAGC CAATCCGGAT CCGCAAACTC
ATACCCTCAC AGCTGCAGCC GCTTGCGGCC CTACTCCTAA CGTTGATATT CGCGGCACCT
GCCTGCTATC GACTCTTTCG ACTAGGACAG AAGCAACAGC AGGACAATGA ACAGCATCAG
GGGAAACTGA TTCTATACGG AGCCACTAGT AGCGCTCTCG CATTCTTCCT CGCAAGCTTT
CAAGTGCATG AAAAGAGTTT GCTTTTGGCT CTGGGCCCCG CTTCTCTGTT GTTTTTTGAC
GATGCGACCT TTGTGCAATG GTTCTCCGTC ATTGCAGCAT GGACACTATG GCCATTGTTG
GTTGTTGATC GTCTGCAAGT CGCATACACC TGTATTATGA TTATTTTCAT TATGTTACAG
CGATTGCTAC ACTCGCTACA ACAAGGATCG ACAGCATCTA CATCGGGATT CTTGGAACAT
TTACCACTAT TGCGATGGGT TCCGCATTTT TCTGGATTGG TGATGCTGCT TTTGCACTTT
ACGGAATTGG GTGTGACGAT TCCGCCCCAC TTACCGGATG TCTTCTCTGT ATTGTGGAGT
ATCGCTGGTT GCGCGTTTTG TTCGTTGGCA TGGCTCGCTT CTTGTTGGCA TCTCTATGGC
GCAAGTGAAC CTAACGTGAA AGGGACCAAG TTTGATTAG
|
|---|
| Protein sequence | MSRSSLNSVR DTGGGTSSSL IVAVVAGLVL LRVLVGYHPH SGQDNYHGLH SAYGGDFEAQ
RHWMELTLHL PVGEWYWYDL SYWGLDYPPI SAYVSWICGW LSHRLVGPES VALETSRGFE
NPTHKAFMRS TVIVLDLLVY GTAVWFWTMH RQYDRNLPDS TRLWRFALAM SQPAILLIDH
GHFQYNTTAL GLSLWAFYFM TLPDFFYCMI GSFMFCAALS FKQMTLYYAP AVFFYLLGRC
FTTRGRFLVQ RFYLLGMTVV ATTFALWWPF VAFGPEGTSH IERAAHVFRR IIPLQRGLFE
GKVSNLWCVL SLKPIRIRKL IPSQLQPLAA LLLTLIFAAP ACYRLFRLGQ KQQQDNEQHQ
GKLILYGATS SALAFFLASF QVHEKSLLLA LGPASLLFFD DATFVQWFSV IAAWTLWPLL
VVDRLQVAYT CIMIIFIMLQ RLLHSLQQGS TASTSGFLEH LPLLRWVPHF SGLVMLLLHF
TELGVTIPPH LPDVFSVLWS IAGCAFCSLA WLASCWHLYG ASEPNVKGTK FD
|
|---|
| |