Gene PHATR_44109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_44109 
Symbol 
ID7203870 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp1007276 
End bp1008506 
Gene Length1231 bp 
Protein Length330 aa 
Translation table 
GC content48% 
IMG OID 
Productannexin 
Protein accessionXP_002186168 
Protein GI219113169 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCGCAGCGTT CTTACAGTCA ACGAGCCAGG CTCTTTGTAT CCAACTATTA TGAGCATCGA 
TCTGTATCCT GCCATCATTC ACGAAGGAGA CCTTTCTCCT GACTCCTTTG GGCCAGAAGT
CGACGAAATT TGCAATGAAA GTAAGTTTGA ATCCGGCCCT CTTTTTGTAG TTTAGGTAAC
TTTAATCCGT GTTCTCATGT GGCGTTCTTC TCCGCCGCGA AGTTGATGCT TCTTGCAAGG
GTTTTGGAAC CAACGAGAAG CGCCTGCTTA AGGCTATGGG ATCCCAGTCT CCCGAGACGC
GCTGCAAGGT GCCACTCCGC TACAAAGAAC TTCGTGGCAA GGAGCTTAAG AACGTAATGA
AGTCCGAATG CGGCAAGCGC AATTTCGGGA CCGCGTTGCA ATTCTTGGCC GTTTCGCCCA
TTGAAGCAGA CTGCGACATG ATCAAGGCCG CTTGCAAGGG TGTGGGTACG AATGAGCTCT
TGCTGTTTAC CATCTTGTGC GGTCGCTCCA ACACGGAGGT CGAACTACTC AAGAAGAAGT
ATTTTGAAAT TCACACGGCG GATCTTGGTC GTGTTCTCGA TGGAGAATTG GGCGGTGATT
TAGAAAAGAT GATTTTCAAT ACCTTGCAGG CTGCAGAAGA AATATTTGAT TCGGACTACC
ATACAGAGGC GCTCATGAAA GAGGACGCTG CGAAATTGTA CGAGATGGGA CAAGGCAAGC
GATTCGGAAC GAACGAAGCA GGACTTTTCA AGATCCTCTG CGCCCGCCCG CCTGAGTATT
TGAAACAGAT GAACCTCGTC TACGCGGAGA AGTACGGCTT CACTCTTCCC AAGGCATTGG
AGACCGAGCT AAACGGGCAT GTCAAGGATG CAGCATTGTA CATGATCGGT ATGAAACTCA
AACCCTACGA AACGGTGGCC AACTTGATTC ACCGCGCTTG CAAGGGTTTC GGTACAAATG
AACTTCTTTT GACGTCGGCT CTGATTCGCT ACCAACCCAT AATGAAGAAT GTTATGGAAG
CATACATCGA ACTCTATGGC GAGACGATTG AGGACCGTAT CAAGTCTGAA TGTGGTGGCG
ACTACGAACG TATTTTGTTG GAAGTGTTGG GCGCCGCTGA ATGATTTTAA CGTGTTCTGG
CCCGTTTGTT TTTATGTCCG GTGTTTTAGC CCTTGTTAAA CTATTTAATG AAAAAGTGTG
TAGGGTGATC TCCAGTCACT TGATGCAGAA G
 
Protein sequence
MSIDLYPAII HEGDLSPDSF GPEVDEICNE IDASCKGFGT NEKRLLKAMG SQSPETRCKV 
PLRYKELRGK ELKNVMKSEC GKRNFGTALQ FLAVSPIEAD CDMIKAACKG VGTNELLLFT
ILCGRSNTEV ELLKKKYFEI HTADLGRVLD GELGGDLEKM IFNTLQAAEE IFDSDYHTEA
LMKEDAAKLY EMGQGKRFGT NEAGLFKILC ARPPEYLKQM NLVYAEKYGF TLPKALETEL
NGHVKDAALY MIGMKLKPYE TVANLIHRAC KGFGTNELLL TSALIRYQPI MKNVMEAYIE
LYGETIEDRI KSECGGDYER ILLEVLGAAE