Gene PHATR_44108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_44108 
Symbol 
ID7203869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp1005776 
End bp1006930 
Gene Length1155 bp 
Protein Length358 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186446 
Protein GI219113725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCGCTCGCC GAGATCACAG TCAATTCTGT TGTTCCCTTG CAGATATACC CACTGGTACC 
GGGACGAGCA CATTTAAAAT GGTCAAAAAT AAAAGGAATA CTGACGCCAA CTCTCTTCTA
ATCCTGGTGC TAGACGTATC ACCACTAGCG TGGGGCGAAC GCGACATTCA GCGAACAGCT
CAGGATAAAT CGAGGGTCGC ACTAGGGAAA CGCAGTGTTG GACCCGCTGT TCTCGAGGAA
GCTTTGGAAG CGACCGAGGC CTTTGCCAGT GCCTTTTGCA GCATCGAACA CGACGCCGGC
TTGGTCCTTA TTGCGGTGGC CGACAATGAG ACAGCCGTTG TATATCCGCG ATCAAACGAT
ATTTCCGAAT GGATGCTCCA TCCGGAAACA TATCTGCCAG ACATACGCAA AATGAAAGAA
CATTTAACAG TTGGAGTGCA CGAATTGCTG CTTCGAGCGG CTTCCAAAGC GCAGTACCTT
TCGGATGCCT CTTCCCGCCA AGCCGCCATG GCAGCAGCGT TCTCCAATGC CCTATGTATA
ATCAATCGAT TTTTAGTAGC CGCTCGAGTG GGTGGAGTCA GTGCGTTGCG GAATGAAACA
CATTTGAACC GCAACGATGA TCAGGGAGTG ATAGCACTAA TGGATGGCAA GGCCAAATCG
AAACCAGCGA GTAAAAAGTT GTCCGGTTGG TCGCCCCGAA TTTTCCTCAT ACAGGCCTCG
GATGATCGAT CAAGAGACTA CAATGCCTTC ATGAACTGCG CGTTTGCAGC TGTTAAACAG
AGCATAGTTG TGGATGGGTG TTTTCTCTCG GCAAAAGGAA ATCACTCGTC GTCGGCATTT
TTGGAGCAGG CATGTGACTT AACGGGTGGC GTCTTTTTGA GTCCATCTGG AACAGCTCAA
GTCGGAGGGG CACTAACAGA AGTTCTACAC AGCGTATTTT TGGCGGATGT GCCTTCTCGA
TGCCTTTTAA ATCTACCGGC AATTAACAAG GTCGATTTCC GTGCCCGATG TTTTGAGACT
GCAGAACTTG TTGACTTGGC ATACGTTTGT AATCAATGTT TGTCCATTTT TCGAAAGCAA
CCAAAAAACT ACTGCCCGAC TTGCCAGGCT AAAATCGTGG TCGACTCAAA GCGGGTTGGA
ACAACTGAAA TTTGA
 
Protein sequence
MVKNKRNTDA NSLLILVLDV SPLAWGERDI QRTAQDKSRV ALGKRSVGPA VLEEALEATE 
AFASAFCSIE HDAGLVLIAV ADNETAVVYP RSNDISEWML HPETYLPDIR KMKEHLTVGV
HELLLRAASK AQYLSDASSR QAAMAAAFSN ALCIINRFLV AARVGGVSAL RNETHLNRND
DQGVIALMDG KAKSKPASKK LSGWSPRIFL IQASDDRSRD YNAFMNCAFA AVKQSIVVDG
CFLSAKGNHS SSAFLEQACD LTGGVFLSPS GTAQVGGALT EVLHSVFLAD VPSRCLLNLP
AINKVDFRAR CFETAELVDL AYVCNQCLSI FRKQPKNYCP TCQAKIVVDS KRVGTTEI