Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_44108 |
Symbol | |
ID | 7203869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 1005776 |
End bp | 1006930 |
Gene Length | 1155 bp |
Protein Length | 358 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186446 |
Protein GI | 219113725 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCGCTCGCC GAGATCACAG TCAATTCTGT TGTTCCCTTG CAGATATACC CACTGGTACC GGGACGAGCA CATTTAAAAT GGTCAAAAAT AAAAGGAATA CTGACGCCAA CTCTCTTCTA ATCCTGGTGC TAGACGTATC ACCACTAGCG TGGGGCGAAC GCGACATTCA GCGAACAGCT CAGGATAAAT CGAGGGTCGC ACTAGGGAAA CGCAGTGTTG GACCCGCTGT TCTCGAGGAA GCTTTGGAAG CGACCGAGGC CTTTGCCAGT GCCTTTTGCA GCATCGAACA CGACGCCGGC TTGGTCCTTA TTGCGGTGGC CGACAATGAG ACAGCCGTTG TATATCCGCG ATCAAACGAT ATTTCCGAAT GGATGCTCCA TCCGGAAACA TATCTGCCAG ACATACGCAA AATGAAAGAA CATTTAACAG TTGGAGTGCA CGAATTGCTG CTTCGAGCGG CTTCCAAAGC GCAGTACCTT TCGGATGCCT CTTCCCGCCA AGCCGCCATG GCAGCAGCGT TCTCCAATGC CCTATGTATA ATCAATCGAT TTTTAGTAGC CGCTCGAGTG GGTGGAGTCA GTGCGTTGCG GAATGAAACA CATTTGAACC GCAACGATGA TCAGGGAGTG ATAGCACTAA TGGATGGCAA GGCCAAATCG AAACCAGCGA GTAAAAAGTT GTCCGGTTGG TCGCCCCGAA TTTTCCTCAT ACAGGCCTCG GATGATCGAT CAAGAGACTA CAATGCCTTC ATGAACTGCG CGTTTGCAGC TGTTAAACAG AGCATAGTTG TGGATGGGTG TTTTCTCTCG GCAAAAGGAA ATCACTCGTC GTCGGCATTT TTGGAGCAGG CATGTGACTT AACGGGTGGC GTCTTTTTGA GTCCATCTGG AACAGCTCAA GTCGGAGGGG CACTAACAGA AGTTCTACAC AGCGTATTTT TGGCGGATGT GCCTTCTCGA TGCCTTTTAA ATCTACCGGC AATTAACAAG GTCGATTTCC GTGCCCGATG TTTTGAGACT GCAGAACTTG TTGACTTGGC ATACGTTTGT AATCAATGTT TGTCCATTTT TCGAAAGCAA CCAAAAAACT ACTGCCCGAC TTGCCAGGCT AAAATCGTGG TCGACTCAAA GCGGGTTGGA ACAACTGAAA TTTGA
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Protein sequence | MVKNKRNTDA NSLLILVLDV SPLAWGERDI QRTAQDKSRV ALGKRSVGPA VLEEALEATE AFASAFCSIE HDAGLVLIAV ADNETAVVYP RSNDISEWML HPETYLPDIR KMKEHLTVGV HELLLRAASK AQYLSDASSR QAAMAAAFSN ALCIINRFLV AARVGGVSAL RNETHLNRND DQGVIALMDG KAKSKPASKK LSGWSPRIFL IQASDDRSRD YNAFMNCAFA AVKQSIVVDG CFLSAKGNHS SSAFLEQACD LTGGVFLSPS GTAQVGGALT EVLHSVFLAD VPSRCLLNLP AINKVDFRAR CFETAELVDL AYVCNQCLSI FRKQPKNYCP TCQAKIVVDS KRVGTTEI
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