| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_44099 |
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| Symbol | HSF1 |
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| ID | 7203865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | + |
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| Start bp | 960374 |
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| End bp | 961889 |
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| Gene Length | 1516 bp |
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| Protein Length | 428 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | heat shock factor, DNA-binding |
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| Protein accession | XP_002186160 |
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| Protein GI | 219113153 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.52958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATAAACAGTC GTCCCGACAG GTTTGTTGTA GTCTCTTCGT TGCTCTTCTA CGATGGATTA
TTTGAGTATT GAAGAACACG CGGCCGCCTC CGCCGTCGCA GCGCTTGGTG GCAACCAGGA
GAACAACAAA AGGTCCCGGG ACGACTCTCC CGATGCTGCC GGTGGTTGCC ACAAGCTTGC
CCGAGTTGAA GACGAGCAGC TCGTTGCTGC CGGAGGTATG GGTCCTCCTC TTCCTCCTGC
TGAAAATGTG GCACAAGGCG CCATGCTCCA GCCTTACCCG ATGTTCTACT ACCGAGACTT
TTCTACTGAA TCGGATCCGG ACGCCTTGAC CCCCTTGACT CCTCCGGGGC GTGTTCCGAA
CTTCCCTGCG AAGATGCATT CAATTCTCAG CCGTCCTGAT CTTGCGGATG TGATCTGCTG
GATGCCCCAT GGCCGATCTT GGCGCGTTTT GAAGCCTCGG GAGTTTGAGA TTCGTGTAAT
TCCCACTTAT TTTGAACACG CCAAGTTCTC ATCCTTCATT CGTCAGGCGA ATGGATGGGG
ATTCCGTCGA ATCACCCAAG GTCGTGATCG CAACTCTTAC TACCACGAGT TGTTCCTCCG
TGGACTTCCC CACCTCTGCA AGCAGATGAA GCGCCCAGGT GTTGCGCAAA AGCAAGCTGC
CGATCCTGAG CACGAGCCTG ATCTTTACAA AGTCTCCGAG ATGTACGCGG TTCCCGAAAA
AGCTGAGGAT GACTCGATTC TTCTCCAGTG CACGCTTCAG GGAGGCCCGA AGGCCCGCAT
GCCCATCTAC TCGGGCGCCC TGAACAACTC CTCTCTCAAG GATTTCAAGA TGCCTGGTGT
TGAAACTGCG TCGTTGACTC CTCGCGACCA GCAAGCACTT AGCGCGTTTC AACAGTCCCT
CGGTGCATCC GAGAGTCAGT TCAAGTCTAT GAGCTTTTCC ACCACAACTC CTCAAGCCAC
CCCGCTTGTA CTTCCGCAGC AGTCTTACAT GACGCCGAAT GCTGCCCCCG TCAATATTCG
ACCAAACGTG GCCACCACAG AAGGAACAAA TAACAATATG TCAGCTCTCA TGGCAGCTAA
TCAATTGGCT TTTTCTCAAC CCAACATGGC CGCGGCCTTC CAAGCAAGTT CCGCTGCATC
GCAGTTTGCA GCAGGATTCG CTGCGGCAAC CGCTTTGAGT CATCAACAGT TCCAAACAAT
GCTAGGACAG TTTGGAGTAG CTGCCCAACC TACCCAAGTT TCGGTTCAAC AACCGATGAG
CATCCAGCAA CAACCCGGGG AGCAACAGCC GCCCATTCAG GTGCAGCAAC AGCAATCAAT
GATTGCGAAC ACGAACTAGG AATACGTTTT CCGTTTACTT TACGTTACGA CGACTAGAAC
GCGGCCACGA GCTCTCCTCA AGTCCTTTTC ATCTTTCCCT TGACACACTC TTTTGCACAA
CTAACTGGCA TTGCATGATT TTAGCTTCAC ATTAATTTCT CTTAACTTTA CGGTTAGTTT
GAGTTTCTGA TGAAAA
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| Protein sequence | MDYLSIEEHA AASAVAALGG NQENNKRSRD DSPDAAGGCH KLARVEDEQL VAAGGMGPPL
PPAENVAQGA MLQPYPMFYY RDFSTESDPD ALTPLTPPGR VPNFPAKMHS ILSRPDLADV
ICWMPHGRSW RVLKPREFEI RVIPTYFEHA KFSSFIRQAN GWGFRRITQG RDRNSYYHEL
FLRGLPHLCK QMKRPGVAQK QAADPEHEPD LYKVSEMYAV PEKAEDDSIL LQCTLQGGPK
ARMPIYSGAL NNSSLKDFKM PGVETASLTP RDQQALSAFQ QSLGASESQF KSMSFSTTTP
QATPLVLPQQ SYMTPNAAPV NIRPNVATTE GTNNNMSALM AANQLAFSQP NMAAAFQASS
AASQFAAGFA AATALSHQQF QTMLGQFGVA AQPTQVSVQQ PMSIQQQPGE QQPPIQVQQQ
QSMIANTN
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