| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_44089 |
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| Symbol | ARP1 |
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| ID | 7203860 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | + |
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| Start bp | 933100 |
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| End bp | 934548 |
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| Gene Length | 1449 bp |
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| Protein Length | 391 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | actin related protein |
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| Protein accession | XP_002186156 |
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| Protein GI | 219113145 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.549451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | CGCCACGCGT GAGGACAAAG ATTGACCATG AGCGCCGAAG GGTCTGGTCC GGAAGGCGGG
TCACTCCTAC TCAACCAACC TGTTGTCATC GATAATGGCA CAGCTAGCAT CAAAGCTGGG
TTTGCGGGAT CGTCCAAACC AAAGGTACGG ACCGAACGCA CCGAAAGTAC CGCAACGAAG
CGTCCGAGGG ACGTCGCTAT GCCCAAAGAT CAGGATCCAG TGTCGGTACA ATTGCAGACT
CCATTGTTTC TACTATACTA ACCAGTCTTC AATTGTTGCA GGTTGTAGTT GGTACCAAAG
TTGGACGGCC TAAGCATATG CGAATCATGC CGGGAGGTGC TCTCGAGCTT GATCAAGGCA
GTAGCATTTT TGTTGGGCCG AAACTGGACG AACACCGTGG CGCCTTTGTT CTGGAACACC
CTATGGACAA AGGTATGGTG ACGGACGGAG GATGGGACGC AATGGAACAC CTTTGGGAGG
TACGTCGAGT GTCAAAGCGA CTTAAATTGT TCGTCATTGG CTACAGTCAC CTAGAAATTG
GTAATGTTCA CCGTAACTCA ACCGTGTGTC TTTTTTTACA CTGCCTAGCA CGTGTATTCG
AAACAGTGCC TGAACGCAAA GCAAGAGGAA CATCCTGTTC TCTTGACGGA AGCGCCGCTT
AACCAACGCA AAAATCGTGA CCAAATTGCG GAAATCTTTT TCGAATCCAT TCGGGCACCC
GCACTGTTTT TTACACCGCC CTCAGTTCTC AGCTTGTACG CTTCTGGTCG CACTACTGGT
GTTGTCTTGG ACGTTGGTGA AGGTGTCACT CACGCTGTAC CAGTCTATGA AGGATTTGCT
TTGCAGCATT CGGTAGTGAG GAGCGATGTT GCGGGTCGGG ACGTCACCAA ACAACTGCAG
ATGCAACTGA GACGAGCTGG CCTGTCGTTC ACCACTACGG CAGAGTCGGA ACTGGTCAAG
AAAATTAAGG AAGAGTCGTG CTATTTGACG CCATCTCGGC TGGCAAATGA AAATACCATC
AAAGAATCCA ATACGCCGTA CCAACTACCC GATGGACAAA CTGTGAACCT GTCCACGGAA
CGGTACCAGG CGCCCAACGT TCTTTTTGAC CCGTCCCTAA TTGGATCCGA GGAACCTGGA
GCCGCCGAAG TTTTGGTCAA CTCGATTATG AAAAGTGACA TTGACTTGCG ATCAAAGTTG
TTCTCGCAAA TCGTGTTGGC CGGCGGTTCT TCGCTCACAC CAGGCTTTGG CGACAGAATG
TTGTACGAAG TTCGTTCTCG AGCTCCCTCA CATTTACGCA TACGTATCTC GGCACCGCCA
GAAAGATTGC ACTCAGCCTA CGTAGGAGGA TCAATCTTGG CAAGTCTGTC GACGTTCAAG
AGCATGTGGG TTTCCCGGTC CGAGTATGAG GAACACGGAA GCAACATTCT ACACCGCCGA
GAGTTGTAG
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| Protein sequence | MSAEGSGPEG GSLLLNQPVV IDNGTASIKA GFAGSSKPKV VVGTKVGRPK HMRIMPGGAL
ELDQGSSIFV GPKLDEHRGA FVLEHPMDKG MVTDGGWDAM EHLWEHVYSK QCLNAKQEEH
PVLLTEAPLN QRKNRDQIAE IFFESIRAPA LFFTPPSVLS LYASGRTTGV VLDVGEGVTH
AVPVYEGFAL QHSVVRSDVA GRDVTKQLQM QLRRAGLSFT TTAESELVKK IKEESCYLTP
SRLANENTIK ESNTPYQLPD GQTVNLSTER YQAPNVLFDP SLIGSEEPGA AEVLVNSIMK
SDIDLRSKLF SQIVLAGGSS LTPGFGDRML YEVRSRAPSH LRIRISAPPE RLHSAYVGGS
ILASLSTFKS MWVSRSEYEE HGSNILHRRE L
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