Gene PHATR_44088 details

Gene Information

• Locus tag: PHATR_44088
• ID: 7204027
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 930302
• End bp: 932392
• Gene Length: 2091 bp
• Protein Length: 583 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002186436
• Protein GI: 219113705

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGATTC CAACATACGG TGCAAATCAG GGAGCCGAAA TCGATGCTTA CATTTCGCCA 
TACGCCAAGG TACGTTCGCT AGGAGCGAGT AACCGAATTT TGTAGCCGGT GTCTTGCACC 
GCATACCCTC GAAAATCTTA ACCTCTTCTC TTGATCAAGG AGGAACCAAT GTCTCTTGAT 
CCTCCGAAAA TAGCAGTACA AGGTCAAGAA GTTGAGGATG CGCAATCGAT ATCAATTGGT 
TCAACCTTGC ACCGGTCATC CTCGGATTTC TGTAAGAGTC AACCGATTGA CGAGCCGAGT 
CTTCGCCGCG TTAGTAGTCG CCGTAAAGCA GAGCATCCGT TGAAAACAAG CAAATCCCCG 
TCGAGGCCGC CATCGGCTCA AAAGTTGCGC AAAAACTTCG TCGGCGTTTT GGAGTCTTTC 
GTCAGACACG TAGCATCGGT AGAGCCGAAT GTGGTTTCAT GGACTGGCGA TGGTTCCGGT 
TTCTTCTTGA ATGAGTTAGA GGATCCCCAA GCTTTGAACG TTGCCATTTC CAAGTTCTTT 
TGGTGTACGT AGGTAGCAAC ACATGTTTGC AGTCACACAG ATGCTGATCT ACATCTCACT 
AATTCATTTT GGACTTTCAG ATGGACGCTA CCCCTCGCTT CGCCGCCAGC TTAATGTCTA 
TGGATTCAAA AAATATAAAA GGAGTCACAG GTACGATTTG TGCGTTTTCG TTCTCGAGCT 
GGACATCCCA TCAGATGACA GGCCCTCATA TACCATTGTA CTCTGTTTCA GATATAAGGG 
AGCATTTCAT CACCCGTCAA TACACCGCAA CATGACCAAT TGGCAATCCC TAATGCTAAA 
ACCCATTGTC CGTCCAAGTA GAGCTTCTAA ATCGAAGAAT GCGCCATTTC TTCGGCACGG 
TAAACCGGTA GATGAAAAGC CATCACCAGC ATCACCACCA AATCGCATGG GAGAAAAAGC 
GGCTATATCC TCCCTGACGG GAAAGTGTGC ACTCGAGAAG CTCAATATTC CAAGCTCCGA 
TGGTTCTTAC GCTGGGCTTC CGGTTGTATC AGGACGGACC GACCGGGCAG CCCTCACGTC 
AGCCTCATCA GGAACGGAAG CCGCTTTGGA AGAGTACGGT ATGTACGACA AATATCACAA 
CTTGATTTCA GGAGGCAATG AAGGTGCAGA TGTGGGGGAA ACTGAAGAGA CTTCCTTTTC 
AATGGAATAT ACCACACCAT CAGAAATAAA GCCACAAATA GGATTGTTTG ATCCTGTTTC 
GTATCTCGAA GGGGGCGGGT TTTCCGAGAA GCGAGACCTC CGGACTCTTG CCGATGCTGC 
GGAGCTAGCG GCGGCTAAGG GCTGGAATAC CAATTTGACA AAGTATTCGC CTGTGATCCG 
AGCTGACTGT AAAGAGAACG ACACTCCTAT TCACGCAATA TATACAAGAG ACCTGGGCTC 
ATTGTGGGAC AAGAGTCCCG CTGCCGTGCG AATGCAGTTT GATTCAACGA CGCCCTTGGT 
TTCAGCCTCG CCTATTGATC CTGGAGTCAG GAAAAATATT GGCAAGTATC CGCATCCTGG 
TATGCCCGAC TACTCGCCTT CGTTCATAAC CTCAGTCTTG GAACGATCTG GAGCTACATT 
GTGGACACCG AATTTTGATG ACAAGGAAAT CGACATTCCG TCGCCTCCAA TGGAACAGTG 
GTTCAGTCCC CCTAAATTTC CATCTCTTCC CATGCACAAA TCATTCAGTC CGGGGAAAAA 
CCTGGATCTC GATACACTCG AAACTTACGT CACAAGGATT GACATTGAGT CGAAAAAACG 
CAAAAGAAGC ACTGTGCTTT GTTCTCCCCC GTATCTGTCT CCTGATTCCC CTACAATGAC 
TTTTGAAGAC TTTTGTAGTG TGTCTAGCGA AATTTCATTC TCAACGGAAA GATTGAGCGG 
CGAGGCTGAA ATCTGTACGG CATCTAGCTA GAGAGCTTCC AACCTTGGTG TTGGGTGTTC 
TTCTTTCAGC ATGCTTTATA TTTGTGTTTG CCAGATGGTG CCAACATCCA AAATGTTGCC 
TGTCAAGGAC GCGTTCCGCT AAACTTTGAG ATACAATCTT TCAGTCAGCC C 

 

Protein sequence

MSIPTYGANQ GAEIDAYISP YAKEEPMSLD PPKIAVQGQE VEDAQSISIG STLHRSSSDF 
CKSQPIDEPS LRRVSSRRKA EHPLKTSKSP SRPPSAQKLR KNFVGVLESF VRHVASVEPN 
VVSWTGDGSG FFLNELEDPQ ALNVAISKFF WFTQMLIYIS LIHFGLSDGR YPSLRRQLNV 
YGFKKYKRSH RYKGAFHHPS IHRNMTNWQS LMLKPIVRPS RASKSKNAPF LRHGKPVDEK 
PSPASPPNRM GEKAAISSLT GKCALEKLNI PSSDGSYAGL PVVSGRTDRA ALTSASSGTE 
AALEEYGMYD KYHNLISGGN EGADVGETEE TSFSMEYTTP SEIKPQIGLF DPVSYLEGGG 
FSEKRDLRTL ADAAELAAAK GWNTNLTKYS PVIRADCKEN DTPIHAIYTR DLGSLWDKSP 
AAVRMQFDST TPLVSASPID PGVRKNIGKY PHPGMPDYSP SFITSVLERS GATLWTPNFD 
DKEIDIPSPP MEQWFSPPKF PSLPMHKSFS PGKNLDLDTL ETYVTRIDIE SKKRKRSTVL 
CSPPYLSPDS PTMTFEDFCS VSSEISFSTE RLSGEAEICT ASS