Gene PHATR_44077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_44077 
Symbol 
ID7204021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp896663 
End bp897522 
Gene Length860 bp 
Protein Length226 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186431 
Protein GI219113695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGAAAAACGA CGCAAGAAAT CTACAAATGG TCGATTCCCA ATCCATCCTC GTCATTGGAG 
CAACTGGGCG TACTGGTCTT GAATGCGTTC GTCAGTTCGC AGCACTCAGT CCCAATCCTT
TCATCCATGC CTTCTGCCGG AATAAATCCA AGCTGTCGAT CGCCGACCAA AACCGCTGTA
CCTCCATCAT TGAGGGTGAC GCTCGTAGTG CAGACAATTT GGAGCGTGCT CTGGCTGATT
CCAGTGCCAC GGACGTAATT CTTAGCATCG GGAATGGAGA TAGCATTAAA AGGACGGACA
TCCGTACGGC ATCGGGCAAA GCGTTGGTTC AGGTCCTCAA GCTTCCAGCC TACAAGAAGG
TTCGTACGCT GGTAATTTCA AGTTCTGGTG CTGGAAGTTC GCAAATCGTT GTTGGGATGG
GTATCGGAAA GCTCATCAGC TTCCATCTCC GCCACATCCT CAAAGACCAC ACCGACCAAG
AGGCCGCATT TTATTCCATT CGCAACCGCA CCACTATAGT CCGCGCTAGC GCATTGACGG
ACAACGCTGC AACCGGAAAG CTTGTAGAAC ATGGAGATCA CGAAAAGGCC TTAACCATCA
AAACGGATCG TGCTGACTTG GCTGCTTGGA TTGTAAACCA GATTTGTGAC ACCGACGACA
GTTTGGCCTT GGGTCGCGCC GTGAACGTGA CTGGTGTCAA AAAGTGAATT GAGACTGCGG
TTTGTATGAC TATTGACGCA ACGAAAAAAG ATGATTTCAC ATTATCAAGT GTATGCGGAC
TACATACATC AACAACCGAT GTGCGGACAT GAATGTCTGT CTAAAGAAGA TTTTAAAGGA
CGATGCATAT CAATGTACTC
 
Protein sequence
MVDSQSILVI GATGRTGLEC VRQFAALSPN PFIHAFCRNK SKLSIADQNR CTSIIEGDAR 
SADNLERALA DSSATDVILS IGNGDSIKRT DIRTASGKAL VQVLKLPAYK KVRTLVISSS
GAGSSQIVVG MGIGKLISFH LRHILKDHTD QEAAFYSIRN RTTIVRASAL TDNAATGKLV
EHGDHEKALT IKTDRADLAA WIVNQICDTD DSLALGRAVN VTGVKK