Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_44077 |
Symbol | |
ID | 7204021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 896663 |
End bp | 897522 |
Gene Length | 860 bp |
Protein Length | 226 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186431 |
Protein GI | 219113695 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGAAAAACGA CGCAAGAAAT CTACAAATGG TCGATTCCCA ATCCATCCTC GTCATTGGAG CAACTGGGCG TACTGGTCTT GAATGCGTTC GTCAGTTCGC AGCACTCAGT CCCAATCCTT TCATCCATGC CTTCTGCCGG AATAAATCCA AGCTGTCGAT CGCCGACCAA AACCGCTGTA CCTCCATCAT TGAGGGTGAC GCTCGTAGTG CAGACAATTT GGAGCGTGCT CTGGCTGATT CCAGTGCCAC GGACGTAATT CTTAGCATCG GGAATGGAGA TAGCATTAAA AGGACGGACA TCCGTACGGC ATCGGGCAAA GCGTTGGTTC AGGTCCTCAA GCTTCCAGCC TACAAGAAGG TTCGTACGCT GGTAATTTCA AGTTCTGGTG CTGGAAGTTC GCAAATCGTT GTTGGGATGG GTATCGGAAA GCTCATCAGC TTCCATCTCC GCCACATCCT CAAAGACCAC ACCGACCAAG AGGCCGCATT TTATTCCATT CGCAACCGCA CCACTATAGT CCGCGCTAGC GCATTGACGG ACAACGCTGC AACCGGAAAG CTTGTAGAAC ATGGAGATCA CGAAAAGGCC TTAACCATCA AAACGGATCG TGCTGACTTG GCTGCTTGGA TTGTAAACCA GATTTGTGAC ACCGACGACA GTTTGGCCTT GGGTCGCGCC GTGAACGTGA CTGGTGTCAA AAAGTGAATT GAGACTGCGG TTTGTATGAC TATTGACGCA ACGAAAAAAG ATGATTTCAC ATTATCAAGT GTATGCGGAC TACATACATC AACAACCGAT GTGCGGACAT GAATGTCTGT CTAAAGAAGA TTTTAAAGGA CGATGCATAT CAATGTACTC
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Protein sequence | MVDSQSILVI GATGRTGLEC VRQFAALSPN PFIHAFCRNK SKLSIADQNR CTSIIEGDAR SADNLERALA DSSATDVILS IGNGDSIKRT DIRTASGKAL VQVLKLPAYK KVRTLVISSS GAGSSQIVVG MGIGKLISFH LRHILKDHTD QEAAFYSIRN RTTIVRASAL TDNAATGKLV EHGDHEKALT IKTDRADLAA WIVNQICDTD DSLALGRAVN VTGVKK
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