Gene PHATR_44066 details

Gene Information

• Locus tag: PHATR_44066
• ID: 7204015
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: +
• Start bp: 867046
• End bp: 869032
• Gene Length: 1987 bp
• Protein Length: 629 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002186144
• Protein GI: 219113121

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGGTCACCGA ATTCTTTCTT GCCTTCCTTG ACGTAAACAA AATTTGCTAG TACTGGGTCG 
CTGTGAATTT CGTCGAACTA ACAACCACTC CCATCCGCCA TGCCGACGTG GGTCGGAATC 
GAAGACGGAT CAGCCCAAGC CTCGAAGGTG TGGCTTGCCC GCCAAGGTGA TCATCAACAG 
CAGCAGGAGG ATTGGTGGAA GCCCTTACGC AAATTGGATT GCGAGGCTTT GAACGTTTCG 
CCCGAGAAGC CTATTTATAT AGAAGAAGGT CGATGCACCG CCGACCCGGT TAGCGGTATC 
GTCTTTTACA ACTTTTTCCG GGGCCACCAG AGACAATTGT GTTCGGCTAT TTGGTTCCTT 
CGGGAAGAAA CCTCCAACAA GGACTTTCGG CTTGTGCCTA TCACCAATGA TACGGACTCA 
GCAGCCATTG AAGCACTCTA TCGAGCTGCC GTTCAAGCGA CGTCTTCATT AGGAAAAGGT 
ATCGCGAGTG TTCTTGATCA GAGAGTCGAC TTGGAACAAG GAAACGCCAA GGTTAAAGTT 
GTGCAAACCG GAAATACTCT CACTATGAAG CAGTTCCCGA GCAACAGCTG GTTCATTGGT 
GGTGGCCAAG ACCTTCAGCG AGGATACGGT CCTTATGTAG TTGAAGGGGA AGAAGACGAG 
ACAGTATTGG GACCTGTCCG TCATCCAGTT TTTGTCGTGC ACGGGATTGG AGAGGCCTTC 
TTTGCGCGGG ACGATGTAAA GATACCCTCC TTGATTAACC AGATGAACGC GACACGTATC 
CACGTGCAAC AAAAACAAGT CTTGTTGTGG AAAATCGCGT GCCAAAAGGC CAAAAAGACT 
GGCCAAGCGC TACCACATCC TCCAAATCGG ATTGAGTTTA TACCCATTGA ATGGTTCAAT 
CGCCTGCACG ACAGCAGTAC AGCACTAATG AAGTCGCTTA AAGCCACAAC ACTGCAATCT 
ATTCCTGCGT TACGAGCTAT TGCGAACGAT GTAATTTTTG ACGTGCTTAT GTACCTGACA 
CCCAACTTTT GTGAATCTGT TTTGGAATGC GTCACGACGC AAGTCAACGA ACTGTACGGG 
GCCTTTGCCA AGGTGCATCC TGGTTTTTTG CCACACGGTG GCAAATGCTC CTTTATTGGG 
CACTCCCTGG GGTCAGTGAT CGTTTGGGAC TTACTGTCGA TACTAAAGGA TCGCGACGAA 
GCCAAAGCCG GAACAACGGC TTCGATGAAT ACACAAGGTG TAGCAATCGC ATCCCCGGAA 
AAAGGAGGGT CTGACTTGGG ATATCAAGCG TATGCCAAAG AGACGGGGGC GAACCAAGCC 
TGTAACGGTA CTTGGGGTCC ATCATTAACC AAACCTATGA CCCGCACGAT TCCTTTTATA 
CCCGAGTGTA CCGTGTTCCT GGGGTCACCA CTGGGGATGT TCTTGACATT GCGAGGTGCT 
CACGCTGTGT TCGACGAGTT ACGCGACGTC GCCATCAAAC AGGCCACTCA CCGGGTAGGG 
GAAGGAAAAA GTGGTAACGA CGAGCACGTA GATGTCCCGG TCACATCTCC GTTCTCACTA 
CCGACTGGAC GCTTGTACAA TATTTTCAAT CCAAGCGATC CGGTGGCCTA TCGGATCGAA 
CCCTTGTTGC TACCGCAAGA TCTGGACTCG GCGGAGTTGC CGGCGCCGCG TTACTTGACA 
GCGCCTGGAA AGGACTTGAA GTTCCACGTC AAGGCTAAAC AGATTACTGA TGATCTCCGC 
AAATCAATTA TGGATCAAAA GATGGTGTGG GGCTCATTGA TTGAATCCGC GGTTTCCGCT 
TTGTCCACCG ACGTGGCAAC GACCAAAGCA GCTGGGTTAG CCAAACCTCA TATCCACGGC 
GGAGCTTTGA ACTTTCCTTT AGGCGGCAAA AGTGATCGGG TTGATTATTC CTTTCAACCG 
GCCGTAATTG ACAACGAATA CATTAGCTCC GTTTTGGCTC ATTCGACGGC CACATATTTC 
GGGAACA 

 

Protein sequence

MPTWVGIEDG SAQASKVWLA RQGDHQQQQE DWWKPLRKLD CEALNVSPEK PIYIEEGRCT 
ADPVSGIVFY NFFRGHQRQL CSAIWFLREE TSNKDFRLVP ITNDTDSAAI EALYRAAVQA 
TSSLGKGIAS VLDQRVDLEQ GNAKVKVVQT GNTLTMKQFP SNSWFIGGGQ DLQRGYGPYV 
VEGEEDETVL GPVRHPVFVV HGIGEAFFAR DDVKIPSLIN QMNATRIHVQ QKQVLLWKIA 
CQKAKKTGQA LPHPPNRIEF IPIEWFNRLH DSSTALMKSL KATTLQSIPA LRAIANDVIF 
DVLMYLTPNF CESVLECVTT QVNELYGAFA KVHPGFLPHG GKCSFIGHSL GSVIVWDLLS 
ILKDRDEAKA GTTASMNTQG VAIASPEKGG SDLGYQAYAK ETGANQACNG TWGPSLTKPM 
TRTIPFIPEC TVFLGSPLGM FLTLRGAHAV FDELRDVAIK QATHRVGEGK SGNDEHVDVP 
VTSPFSLPTG RLYNIFNPSD PVAYRIEPLL LPQDLDSAEL PAPRYLTAPG KDLKFHVKAK 
QITDDLRKSI MDQKMVWGSL IESAVSALST DVATTKAAGL AKPHIHGGAL NFPLGGKSDR 
VDYSFQPAVI DNEYISSVLA HSTATYFGN