| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_44056 |
|---|
| Symbol | PetJ |
|---|
| ID | 7204234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011671 |
|---|
| Strand | + |
|---|
| Start bp | 833629 |
|---|
| End bp | 834813 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | cytochrome c6, cytochrome c553 |
|---|
| Protein accession | XP_002186138 |
|---|
| Protein GI | 219113109 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CCGTTTCCCA TCGTTCTCAC TTTTCATTCC CGGATGATAA GGAGTACCTA TTGGAACATA
GAAATTTGAA AATATAGGTA AGTCGTAAGA CTACCTGTAG TAGTCTTGCG CGCCAGCTAG
GTACTTCGTT GTGTCTGACC AAGAGACAAA ACCAACCCCG GAGACTAAAT TGAAGGCGTA
TCTTCGGGGC TCTTGACATC GGCGGAATCT TGCTTTTCGA AGTGATCCCT CGTGAGCGTT
CCCGTTCACG TAGAACACCT GTAGACTTAC TACTTGGAAA ACGAGCTTGC AGGTCGGTTG
GTTCGGTGCC TCTCGAATGC CATGACGTGT TGGGCGACGG AAGCCCCCGA TCTTTCCGCT
CTCAACATCC ATACTTTCCA GTGTCAGCGT TTGTAAACGA ATACCATCAC CATGAAGCTC
GCAGTTATCG CAACTCTTCT CGCCACTGCC TCGGCATTCT CCATCCAGGC TGAATTCAGT
AAGGTAGGCA TAGAACCATT GTAAACCAAC GCGATATAGA CATTTCCACG ATTGCCAACC
GATGTGATGC CGGTGGAGTA CCGGGGCATC TTCAACCGTG CTCGCGTGAA GACCCGTGCT
TGGCACGCAT CGCATGTGGG ACACTCTCGG ATGTAGTCGT GTTTGGTACC GGATTCCGAT
TTCCGGACAG ATTCGGAAGA ATGCCTCGAC ACTTTGCATC CTCATGGTCG ATCAACCAAT
CCCAGCCACA GCTCACACTG ATTTTTTTAC GATTGATCCA CAGGTCGCCA AGGGTGCCGC
CGCCGTCGGT GTTGGTGCCG TAATTGCCGC CGCCCCGGCA CTGGCTGGGG ACGTCGGTGC
TGGTGAGCAA ATCTTCAACG CCAACTGCGC TGCCTGCCAC GCCGGTGGAC AGAACGTCAT
TATGCCGGAA AAGACCCTCG AGAAGGAAGC CCTTGATCAA TACCTTGCCG GCGGACGTTC
CGAGAAAGCC ATTATCTCCC AGGTCACCGG AGGAAAGAAC GCCATGCCTG CATTTGGCGG
ACGTCTATCG GACGAAGAAA TTGCCAATGT TGCCGCCTAC GTTCTTGCCT CGGCTGAAGC
CGGATGGGAG TAAAGAGTCG GGCTGTGCTA CTATTTTCCT AACGTATAGA CCATCTTTGA
TCCTTGGCTA CTTCGTTATA ATAGTTCAAG TATTAGGTGT TAGTG
|
|---|
| Protein sequence | MKLAVIATLL ATASAFSIQA EFSKVAKGAA AVGVGAVIAA APALAGDVGA GEQIFNANCA
ACHAGGQNVI MPEKTLEKEA LDQYLAGGRS EKAIISQVTG GKNAMPAFGG RLSDEEIANV
AAYVLASAEA GWE
|
|---|
| |