| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_44051 |
|---|
| Symbol | |
|---|
| ID | 7204232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011671 |
|---|
| Strand | - |
|---|
| Start bp | 818662 |
|---|
| End bp | 820567 |
|---|
| Gene Length | 1906 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002186419 |
|---|
| Protein GI | 219113671 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCAC CAAAGAGTTG TCGTTCCCCG CGGGTACAAT ATCCAAAGGT TTCATCTTCC
ATTGCGATGA CGAACAACAA CGACCGCCAC TAATGTTTCG TCCTCTCACA CGTCGTCGAC
AACAACGAAT CAACTGACGG GTCCCAACAT TCGCCACCGA TCCACCCGAC CCTCGCTTTC
CCCAGATGCT TCGCGAACGA TCGTGTCGAC CGATGCATCC ACGACAACAT CCACTTTGTC
AGCCAAGACC CGCACACGAC GATGGCGGTT CACTCATCGT CCGTTCGGGT CCCGAACCGC
CCTCGGCGTC GGCGGTCTCG TCGTTGTCGT CATCTGGATC GTTGTGGCCC TTTGGTGGGG
CAACGTTTTG TACTGTGCGG ACGAGACCGT CGGAATCTGC GCGTGGACAG TCTGGTCCGT
CCGAACTCCC CAATCCCCTA CTCCCTCCTT GCCCCCGTCG TTGCCGCGTG GACCGCCAGC
ACGACCGTCA CCACGTCGGA CCGATGCACC ACCCCGGGTC GTCTACTGGG ACGACGACAA
TACCAAAGGC CACCATCACG TGCGGATACG TTCTCCCCAA TCACCGCCGT CACTACTATT
CACCACTCCC ATTCGGTACC CCAGTATTGC GTACGAAAAT AGAGTTCTCC TACCCCGCGA
CGACTTCATC CGCGAAACCG ACAAAGTTCC GCTCTCCGAA GACGGCAACA CTACCTGCCT
CCCCCTCGCC GAGTGGCAGA CCCAGTCATT CCCCAACTGT AACCTTGTAC ACGAAATATC
CCTCTTGCAG ACACGAGAAG GTGCTTCACT CCGCACGGAT GAGGGCCGTT TGTCCAAGCT
CGGCGAAGGT TGGTTCCGGA CCACCTGGAA GTACGAACAC ACGGGCCATC ACGACACCAC
CGCTGTCCCC GCCACCGACA AACACAACCG ACACCATCAC AAAACACCCT TCCAACCCGA
AACCGTCGTA CTGAAAACCC TCCGCATCGT TCGGGAATTC GAACCCGAGT ACTACGAACT
CCACCGCCGC GACGCCGTCG CTATGGAACG ACTTACCCAT TCCGATTACG TCGTCAACGT
ATACGGCTAC TGCGGACAAT CGGCCGTCAA CGAATACGCC AATTTCCCCT TCGGCGGCGT
GGCCAATCTC GAAGACTTTG ACCGGCGCGT CCGGGGCAAA CACGACGCCC GCGCCATGGC
GATCAAACTC CGCCTGGGCG CCAGTGTCGC CTTGGGCGTT GCCCATATTC ACCAAGCCGG
TACGCACGAT CCCTACGCCC CGGCCGGAAT GGTCCACTAC GACCTCAATC CCCGCAACGT
GGCGCTCTTT GCCGGCGGTA TTCCCAAAAT TAACGATTTC AATATCGCTG AATTTCTCAC
CTACAATCCC GCGACCAACC GTACTTGTGG ATTTCCCGGC CGCATGCACC AACCGTGGTG
GCGGGCGCCC GAAGAAGTCG GGTTCGGGAA CGCCAGTGGT ACCGCTCCGC TTCTCGACGA
AATGGTGGAC GTGTACGCCC TCGGGAATTT GCTCTTTCAC GTACTGACGA CCCACGCGCC
GCGCGGGAAA ATGAAAGCCT ACCGGATGGA CGAGGTTCGC GAGGTAGTGG CGCGGGGGGA
CCCGCCGGTG CTGATGGGAC ACTTTGCGAC TTCCAAAGAT CCCGTCGTCC GGGCGTTCCG
CAAAGCCATG GATCTGTGTT TCGCTAAACG ATCCGAGGAC CGCGGGACGG CTTACGAAGT
AGCTATTGTG CTTTTGGACG CCTTGAAGAA TACCAAAACC AAGCATCGAT TGCCGCACGA
ACAACCGGAG GAAGAAGAAC AGGAACCGGA CCCGGTTGTC GAGAACGAAG AGCCGGACGA
CGAATCCGAC GACGAGTCTG AAGACGTGAT TGAACCCAAG GGCTGA
|
|---|
| Protein sequence | MAPPKTKTRT RRWRFTHRPF GSRTALGVGG LVVVVIWIVV ALWWGNVLYC ADETVGICAW
TVWSVRTPQS PTPSLPPSLP RGPPARPSPR RTDAPPRVVY WDDDNTKGHH HVRIRSPQSP
PSLLFTTPIR YPSIAYENRV LLPRDDFIRE TDKVPLSEDG NTTCLPLAEW QTQSFPNCNL
VHEISLLQTR EGASLRTDEG RLSKLGEGWF RTTWKYEHTG HHDTTAVPAT DKHNRHHHKT
PFQPETVVLK TLRIVREFEP EYYELHRRDA VAMERLTHSD YVVNVYGYCG QSAVNEYANF
PFGGVANLED FDRRVRGKHD ARAMAIKLRL GASVALGVAH IHQAGTHDPY APAGMVHYDL
NPRNVALFAG GIPKINDFNI AEFLTYNPAT NRTCGFPGRM HQPWWRAPEE VGFGNASGTA
PLLDEMVDVY ALGNLLFHVL TTHAPRGKMK AYRMDEVREV VARGDPPVLM GHFATSKDPV
VRAFRKAMDL CFAKRSEDRG TAYEVAIVLL DALKNTKTKH RLPHEQPEEE EQEPDPVVEN
EEPDDESDDE SEDVIEPKG
|
|---|
| |