Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_44028 |
Symbol | |
ID | 7203991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 736635 |
End bp | 738972 |
Gene Length | 2338 bp |
Protein Length | 576 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186406 |
Protein GI | 219113645 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.566406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCGAAAATCG ATCGAAATCG ATTTTTCTGG TCTGATTGCG AAACGCTCTC GCACCTGCAC GATCTTCTCC GAATGTTTTT GGTTCTGACT AGAATGCGAG ATTCTCCCTC CATTTTCGTG CTACGGGCCG AAGCTGCCGT ATTCCACAAA AGCCTGCGCG CACTTTGGCC CGAAAACTTC TTTTCTGTTC CGTCGCTTCA CATCCGCTTT TTTACGGTTG CATCGAAAAT CACAAGGGGC TCAGTGCCGA AAATCCACAC TCCGAGGCCG GGTTTGCATC GCTTGCTATC GCTAACATTT CAGTTTGTAG GTGGCCATGC ATGTGATATC CGGTAACAAC GCAGATCACA TCGAAATCAG CGATTCTAAT CAGAACCCGT AGAAATGCTG GCATGAGGTT CTGCTTGCTC CTCTTTCTTA CTCTGTTGGA TAATATCGCC GGGAGCTTTA TTCAGCGCTC GCACGCAGGT TCGTTTCGCA CTTTGACGCT ACGGACACAT AAAAAAACTG ATACGGAAGA ACATGGCGGA CCGCAAAAGC TGAATATACA GCAGGAGTCA TCGTTGTTTG ATATAAGAGC GCAATGGGAG AAGACTACCT CAGAGTTTGA TCCAGTCGAT TTCTGGAAGC AAATTGTACG AAATGACGAG ACGATAAATG ACTCAGTAGT CAACCGAGAA ACAAACGAAG AGGGAAGAAT AACAGAATTT TGGGATGCGC TGAAACACAA TACGGATAGT TCTCATCTTG AAGACGCGTT CGGCAACGTG GACTTTCATG GCATCGGGCA GAATCTCATG GGACTGATTT CCGGCGGTTT TCACAGCGAT GTCACGGTGA ACGACATCAT CGAACGCGTT CGTGACAGTA CAAACCAAGA CGATAAAGAA GATTCTAAAA GATTCGATAT TATCATTGAA ATGATTCAAA ACTACAAAGG TCTGATCACA GAAGTCATGG CAAAATATGT GCTGGATACC GTTGATTTCA GCCGTTTCCG GCCAGCCTCA CTTTTTTACT ACATAGAAAA AGAAGACTCC ATCAAGACAC CGAGCTGGAA AAGGAGGCAG CACCGCTTTT GCCCTGAGGT CGACTTAAAT ATGGTAAAGA ATCTCAACAA CGACTTAGCG CTGGCGCGTC TTAGCTATGC AGATTCCTGC GATGAAATTC GTGAAGGACT ACGTCTTTTC AAGATGCCTT ACGAGCTGGT CTATGCAGAA GTTGAAAGCG AACCAGGAAA ACCAGGCCAC TTCATTGCTC TAAAACGAAA CCAGCCCTTC CGAGGCGGAG AGCTTGAAGC TATTTTGGTT GTCAGAGGGA CCAAGACAGT AGCCGACGTC GTTACGGATC TTTGCTGTGA TATCGTTGAG TACAACGAGG GAAAGGCGCA TTCCTTCATG CTTGCTAGCG GACAGTATAT TGCCGAAAAA CATACACAGC TATTCGCAGA TCTGTTAGCC AAATCAGGTA AGAGTAAACT GAAGCTGACT CTTGTTGGGC ACTCCCTGGG AGCTGGTGCT GCAGCAATAG CTGGCATGGA GCTTAACGCG CACCCTGATA TCAATGTAGA AGGAGTTGGG TTTGGCTGTC CTTCTCTTGT GACCCAAGAG CTGGCAGAGT ATACTTCTTG GTATGTTACC GTCGTCAACG ACTCCGACGT GGTCCCTCGT GCAAATCCAG TTACTGTTGC CAATGTTCTG CTCAACATCA CAGAATACGA TTGGGTCCCC AGCGCCAAAC GTGATGCCCT TCAAGTCCTG AATGAGCTTC ACCGGAGACA ACCCTTTATC TTTCAAGAAG GAGTTATCGA AAAGCTGCAG GAAATGCTTC AGCCTTTGAT TGAATCAGCT GATAGCGGTC CGAGATCTAA ATTGTGTAGT GACGGAGAGC GGATTCAACC CATTCTTGTC CCGCCAGGAA AATGCATTCA TTTCTACCAC GATGGCTACC GAATATCAGG CCGTTACGTT CCGAACTCTT TTTTTTGTGA AATCGATGTA ACTCGGCGCA TGTTTAAAGA TCACTTTTTT GATAGCGGAT ACGAGCAGGT CTTTCTGGAC CTCATGCGGC AGGAGAAAGG TGACCCCCAC TTTCGATTCA AAGTGGAACA AACCGAATAT TGATGAAATC TTTTTGATTT ACCTAAGGCC TCGTCAAGTT TGGCCTTCTC AAAGATACTA GCAGACCCTC TGAAGGATGG TTTTTGAGAC CGTCTACTCC CTAGCTTTGA CAACGGAGAC AGTCAAAAAC GGCAAGCGAC CAATGTAATT GATTCCGCCA CATAAGTTAA GGATATGCTA GAAGCATAGC AAAATAAAAA TATCAACGCC TCGCCTCT
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Protein sequence | MRFCLLLFLT LLDNIAGSFI QRSHAGSFRT LTLRTHKKTD TEEHGGPQKL NIQQESSLFD IRAQWEKTTS EFDPVDFWKQ IVRNDETIND SVVNRETNEE GRITEFWDAL KHNTDSSHLE DAFGNVDFHG IGQNLMGLIS GGFHSDVTVN DIIERVRDST NQDDKEDSKR FDIIIEMIQN YKGLITEVMA KYVLDTVDFS RFRPASLFYY IEKEDSIKTP SWKRRQHRFC PEVDLNMVKN LNNDLALARL SYADSCDEIR EGLRLFKMPY ELVYAEVESE PGKPGHFIAL KRNQPFRGGE LEAILVVRGT KTVADVVTDL CCDIVEYNEG KAHSFMLASG QYIAEKHTQL FADLLAKSGK SKLKLTLVGH SLGAGAAAIA GMELNAHPDI NVEGVGFGCP SLVTQELAEY TSWYVTVVND SDVVPRANPV TVANVLLNIT EYDWVPSAKR DALQVLNELH RRQPFIFQEG VIEKLQEMLQ PLIESADSGP RSKLCSDGER IQPILVPPGK CIHFYHDGYR ISGRYVPNSF FCEIDVTRRM FKDHFFDSGY EQVFLDLMRQ EKGDPHFRFK VEQTEY
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