Gene PHATR_44005 details

Gene Information

• Locus tag: PHATR_44005
• ID: 7203978
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 669627
• End bp: 673216
• Gene Length: 3590 bp
• Protein Length: 1135 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002186393
• Protein GI: 219113619

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.861173
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGATCAC CACGCCGTCT CATCTTTGAG CCACTTCCTC CGCCCCCAAC CAGTCCAGAC 
ATGGACCACG ACGCATCTCC TTTTCTTTCA CAAAGGTACA CGACTAGCAG GCGCCGAACG 
CACACTTTCC GACGAGTCCA ACGTGTTTCT CGCCACGCAG CTCTAACCAC GAAACAACAT 
CTATGGGATT CCAATGATGC AAGCATTGAC GCTGCCGTCG CAGCTGTCGA TCAGTGGGAA 
TCTGCCTACA ACGCGTTAAG AGGTCTGGTC GTTGCCGGTG TTCAGTCTGC GAAAGGTGTC 
TATGGCGGTC TCAAGGAAGG GGCGGGAAAA ATTGAAAACG GTGTGTTGCT ACCTGTTAGA 
GATTGGATTA TCCTACCAGC CTTCTTTGGT GTTGAACACG CAACGGCGGA AACAGCGAAG 
TTTCTTCAAA GTGAAGCGGC GCATCAGCTC GCGGGTCAGT CACTTGAGCT CGTTAAAAAG 
GTTCCGATCG TAGGGGACAA CGTGCTCGCA CCTGCTATGT ATTTTTCGGT TGGACTCGTT 
CAGCGAACCT GGGAAATTGT ACAGTACCCA ATTCCATCAA AACAACAAGT TCGAGGCTCG 
GTCGAGCTTG CTTTAAATGG TACAAAATGG GCGCTTTCGA CTGTTGGACG TGAAGTTTAT 
TTGTATTTTA AACGTGCGGA TGCCAATATC ACTCGCACAT TAATGCATAC GCAATGGAAA 
GTGCTAGGAA GTGGCCCCTA TGCAACGCTT GATAAGCTGA ACAAGAGTGA AGTCATCAAT 
CATTTATGTG AACGATACTT CAGTCTTGAG GATGCAATAT CACGATATGA GCTGGCGGCT 
CACATTAAAA GCCATAATGT ACCATTGTAC CATGATCTTG TCGTGTCAGG TTTGTTGAAG 
GATAGAGGAG GGGGCATTAC AGAAGACGAT GAATGGCTCA GTTCATGGCC TGTATATCGA 
CATCTTGAAG ATCCATTTCT GATCCCTGAG GAAGAGAAAC TTTCCGGCAT CGAAATATCG 
TCTCTTTGGT TCCGTTTGCC CTATCTGAAC GGAAAGCGAC CTTCTGGTAG GGATCAGCGC 
TGGGTTTGTT TCGGTCGCAT TGAGCAGAAT ATCCTAGAGG ATCGGTACCG CCATGTGATT 
AGAGAGGGTG TTACGGTTTT AGGCATTGGT GAAGAAAGGA AAGCTGGTGC GATGGAACCA 
AGCGGTTTGG TTAATGAGGC GGACAATCAG ATTTCTGCCA ATCATACTAC AAATAATTTG 
TCAAATGTCA CGTCTGCGGA GACCAATTGC GTAGAGTATC CCACCATCGC AAAATGGTAC 
GTGCCTAATG CTCAAACCGA TGTCTTTTTA GATCAGAGGC GTCATACTGT GTCGCTGTTC 
CTTTGCTGTC CAAAATGCCG AAACGAAATC GCAAGGTCCA TCCCGCCACT GGTGGCGAAA 
GAATACGGGG AGCTCTGCGA CTCTTGCAAT GAACAGGATG CCCAAATGCC ATCCGTTTCT 
ACTCTACTAG CTCCACCGCC AATTGGCGCA GTCATGCGTC CAACTTTTTG GAGGTTTCAT 
GGTCCGGGGG ACGAAGTTCG AAGAGCAGCA TGGATACTTG ATACTCCGAG GCACGGTCTG 
CAGCCTTTTG ATGAGGAGGC GCAATCTGTC TTGGAAGATG CCTATCTTTT CTTAAAATGG 
ATGTCCGTTC GCCAAGAGTT TCGTCATGAG TCTGATTTAG ACAGCGCTCT TCTAACAGGT 
ACATGGAGCT CTCGATACTT CGAAGGGGTA GTCCTTTGCG GCTCAAAACG AACTCATTTT 
GTTTGCTTTG TTTTCAAATA GTGGAGGTAC CTTGCCCTGA TGGGACGGAT AGACTTATCC 
AATTTAGTTC CTTGACTCAA GCTACAGCAA TTCAAAAAGG TATGCTGCCA GCCGTTGCCA 
TCTTCAAGAG AAGGGTATAT CGGGGAGCCT GGTTGCAAAA TTCTGCTGCA GCTCTATTAG 
AAACAAAGAC CCAAAAGCAG GAACTAGTGT CAGTTCAGGA ATCTATTTTG CAGGCAGTTC 
AAGATAATGG TGCTCTCGGC GAGACAATAG TACCCGATGC AGCGCTGCGG ACCGTTCTCT 
CTCCTGGCAA ACGTCAAGAT GAAAGCCGTC TCGTGCTCCA CACGAGCGGC GACGATCTTG 
CCGTTCCTCC CAGTAGACTT TGGGAGGAAG GATCATCTCC CGTAATGGAG AGCCATCCTC 
AGGCCGATGT CGATCACCTC ATCCTCGTCG TTCATGGAAT TGGGGAAATG CTACGTTCAA 
TAGATGTTTT TGGTCTTGCA ATGCCCAATC TCTCTTCGAT TGTGGATTGT TGTGGTTTTC 
TGCGGAAGAA TCACTCCGAA GTCCAAGATG CCCACTTTGC TCAGATGTAC CCAACGGCTG 
ACGCCACTTC AAGAGCCTCG ACTGGTAGAG TGGAGTATCT TCCTATTGAA TGGCATGAAT 
CTTTTTCTCT TTTATCTCAA CGACGGTCGA CTTCGGAAGC TACACCCAAA CACAATGTTA 
TGATCAAAGA CATCTCATTG CGAACGATTC CGAACATGCG AGAGTTCGCG AATGACACTC 
TGATGGATGT TTTATATTTC ATGAGTCCAG AACACCACGA TATGATCATG TCCATCGTAA 
CAAATGAAAT GAATGTTGTT GTTGAAAAAT TTGCTGCCTT AGCTGGTTTC TCTGGACGAG 
TATCTTTAAT TGGGCACTCC TTAGGATCCA TTATTTCATG GGACATCCTT GCTAATCAGT 
CGCTGGACAT ATTGGGGGAA AGTGCCAAGC AATCCTTACA TGGTGTGCCT TCAATTGAAA 
CCTTTGGCGG CACGGGGTTT TCTAACTACG GTAGTGCTAC TTCAGTTGGA CATGACGCAC 
CAGAGGTGAC GCAGCAGGCG ACTCGATTTG AAGGATTGAA GCCCTATCCA AAGCTCAGAT 
TTGCGGTTGA CAATTTTTTC TTACTTGGTT CTCCGGTTGC CGTCTTTTTG ATGATACGAA 
ATCAACGAAA GCCTTTGTGT GAGAATTATT TTCTTTCTGG GTGCAATCGG GTATTTAACA 
TCTTCCATCC ATATGATCCT GTCGCTTATC GAGTGGAGCC CTGTATTGAT CCCAGAAACG 
CGGACTTCGA GCCTACCATT ATGAAACATT GGAATGGTGG CTTTCGCGTT CAGTACCAGA 
CCAAGCGGCT TTGGAAAAAG TTTGTTGACT CAACTTGGAA GACACAGCAG AGTGTTGTTG 
AGGCATTTGA AGCAAGCATG GCTGGAATGG GTCTGCTTGA TGCGACAACA GACACATTCA 
ACGACGACGA TACTTCCGCC TCAGAAATAA GTTCAGACGA TAATCGAAGT ACCGCCAATG 
TCATCGCTGG AAAGTTAAAT CAAGGAAGGC GTATTGATTA TATGCTCCAA GAGAAAGAGA 
TCGAGACAGC CAATGAGTAC GTTGCCGCAC TGGCGGCTCA CAGCTCTTAC TGGATTGAAA 
AGGATCTTTC TTTGTTCGTT GCACGCCAGA TTTACCTCAG CACTCTTGAA CAATCAGCAG 
AGGCTGCTGA AGCCAGTTTG TGGGAGTCTA TTGGGAGTAA CTCTGTGTAG 

 

Protein sequence

MGSPRRLIFE PLPPPPTSPD MDHDASPFLS QRYTTSRRRT HTFRRVQRVS RHAALTTKQH 
LWDSNDASID AAVAAVDQWE SAYNALRGLV VAGVQSAKGV YGGLKEGAGK IENGVLLPVR 
DWIILPAFFG VEHATAETAK FLQSEAAHQL AGQSLELVKK VPIVGDNVLA PAMYFSVGLV 
QRTWEIVQYP IPSKQQVRGS VELALNGTKW ALSTVGREVY LYFKRADANI TRTLMHTQWK 
VLGSGPYATL DKLNKSEVIN HLCERYFSLE DAISRYELAA HIKSHNVPLY HDLVVSGLLK 
DRGGGITEDD EWLSSWPVYR HLEDPFLIPE EEKLSGIEIS SLWFRLPYLN GKRPSGRDQR 
WVCFGRIEQN ILEDRYRHVI REGVTVLGIG EERKAGAMEP SGLVNEADNQ ISANHTTNNL 
SNVTSAETNC VEYPTIAKWS IPPLVAKEYG ELCDSCNEQD AQMPSVSTLL APPPIGAVMR 
PTFWRFHGPG DEVRRAAWIL DTPRHGLQPF DEEAQSVLED AYLFLKWMSV RQEFRHESDL 
DSALLTVEVP CPDGTDRLIQ FSSLTQATAI QKGMLPAVAI FKRRVYRGAW LQNSAAALLE 
TKTQKQELVS VQESILQAVQ DNGALGETIV PDAALRTVLS PGKRQDESRL VLHTSGDDLA 
VPPSRLWEEG SSPVMESHPQ ADVDHLILVV HGIGEMLRSI DVFGLAMPNL SSIVDCCGFL 
RKNHSEVQDA HFAQMYPTAD ATSRASTGRV EYLPIEWHES FSLLSQRRST SEATPKHNVM 
IKDISLRTIP NMREFANDTL MDVLYFMSPE HHDMIMSIVT NEMNVVVEKF AALAGFSGRV 
SLIGHSLGSI ISWDILANQS LDILGESAKQ SLHGVPSIET FGGTGFSNYG SATSVGHDAP 
EVTQQATRFE GLKPYPKLRF AVDNFFLLGS PVAVFLMIRN QRKPLCENYF LSGCNRVFNI 
FHPYDPVAYR VEPCIDPRNA DFEPTIMKHW NGGFRVQYQT KRLWKKFVDS TWKTQQSVVE 
AFEASMAGMG LLDATTDTFN DDDTSASEIS SDDNRSTANV IAGKLNQGRR IDYMLQEKEI 
ETANEYVAAL AAHSSYWIEK DLSLFVARQI YLSTLEQSAE AAEASLWESI GSNSV