| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_43953 |
|---|
| Symbol | |
|---|
| ID | 7204178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011671 |
|---|
| Strand | + |
|---|
| Start bp | 523054 |
|---|
| End bp | 524058 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002186076 |
|---|
| Protein GI | 219112985 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GCTGCTACTG CTACTCCTAC CACTACTACT GACGCTAACA ACACCTGCAC GTTCCCTCTG
GTTGTGAAGC AGATCCTGTA AGACGAAATG GCTACCGAGT CGAAAGTAGG GTCGGAACTC
GCGGATCCCA ACAAAGAAGA ACAGCAATAC GAAGACGAGA CCCACACCGA TGCTTCAACC
TCTACCAGTC TATCCGTCGC GGAAGACCAC GACGACGATT CGGCTTGTTA CGCCGATATG
GGATTCATGT TTGAAGGAAG CCAGCCCACG TCAATTCGAC GTTTTCAGTT TCCGAAAAGG
GACGGTTCTG CGGTACAAGT AGTTGTCCGT GTCGTTGACG ACGACCCCGG CGCCGTTCAG
TCGGGTCACT ATCTGTGGCC GGCCGCCCAA TTGCTCGCGG AGTATATGGT TTCGTTGCCT
CCACCCGCAG TACCGGTAAT CTCCGTTTTG GAACTGGGCG CGGGCTGTGC ACTAGCGGCC
TTGACCGCGC TGCAGTGCTG GCAACCAACT TTGCAGTGTG TCGTCGTCAC GGACCACGAC
CCGGGGACCC TACAGCGTGC CCGAGACAAC CACGAATCCA CCATCGAAAG TATCATGGAT
GCGGCAACCA GTGAAGAGTC TCTCGAACAA ACTATTAATA GTCTAGCCAG TATTCCGGTG
GAATTTCGGG AATACTCTTG GGGGACTGAT CCTGCTCCCT TGACGGCCGT TCTCGGTGAG
CACGTCAACG TCAAAGCCTG CGACCCCAGT CCGACTTGGT TCGATCTCAT CCTCGGAAGT
GATTTGATCT ACGATACGGC CGTGGTGGAA CCACTGTTCA CTACGGTGGC TCCGCTGATG
GCGAGAACTT CCCGATTCTT ACTGTCCCAA AGCTTCGTTT ACGAAACCGT GACGGAAGAG
GAAATCCAAC GCGTTTGCGA ATTGTTTGGC CTGACTCGAA CCATTCTACT AGATGATGGG
CAAGGGGAAC GACGAATACA AGAGTTCACG CGTGGCAGAC AGTAA
|
|---|
| Protein sequence | MATESKVGSE LADPNKEEQQ YEDETHTDAS TSTSLSVAED HDDDSACYAD MGFMFEGSQP
TSIRRFQFPK RDGSAVQVVV RVVDDDPGAV QSGHYLWPAA QLLAEYMVSL PPPAVPVISV
LELGAGCALA ALTALQCWQP TLQCVVVTDH DPGTLQRARD NHESTIESIM DAATSEESLE
QTINSLASIP VEFREYSWGT DPAPLTAVLG EHVNVKACDP SPTWFDLILG SDLIYDTAVV
EPLFTTVAPL MARTSRFLLS QSFVYETVTE EEIQRVCELF GLTRTILLDD GQGERRIQEF
TRGRQ
|
|---|
| |