| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_43944 |
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| Symbol | |
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| ID | 7204173 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | + |
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| Start bp | 498908 |
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| End bp | 500582 |
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| Gene Length | 1675 bp |
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| Protein Length | 493 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002186072 |
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| Protein GI | 219112977 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.323695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TCGATTCGAT TTATCCCTGG GTATAGCTTT AATCGACGAC GACGATGATG ATATTGTCCT
CTACCGCCGC TCGTGCAACT GCCAAGGCTT TGAGTCGACC CGGTTCTCGG GCGTTGGCTT
CGCAAGCGGA ACACAACTTG ACGAGGTGAG TTGGGCACTA AATAGACGTA GAAATATGGA
CTCCAGGAAA TTTCGCCATT CCGAATGCTC ACATTCTCAT CACGCATATT CTCTCTCCCA
GTGGTTTTAA CTTTTTATCC GACCAAGACC GTATTTTTAC CAATTTGTAC GGCGAGCAGG
ATTGGCGTTT GCCCGACGCC ATTAAGCGCG GTGATTACCA CTTGACGAAG GAAATCATGT
GCATGGGTCC GGACTGGATT ATCCAGGAAA TCAAGGACAG TGGGCTCCGG GGACGCGGTG
GAGCCGGCTT TCCCTCCGGG CTTAAGTGGA GTTTTATGCC CAAGGAGACA GACGGAAGAC
CCTCCTTTCT GGTTGTCAAC GCGGACGAGT CCGAACCCGG TACCTGTAAG GACCGCGAAA
TCATGCGCAA GGACCCGCAC AAACTCATTG AAGGTTGCAT CCTGGCGGGC TACGCAATGC
GTGCCCGAGC AGCCTACATT TACATTCGTG GAGAGTATTT CAACGAAGCC GTAGTGCTGG
ATGAAGCCAT CCACGAAGCG TACGCCGCCG GACTCCTCGG GAAGAACGCC TGTGGTTCGG
GGTACGACTA TGACATCTAC CTCCATCGAG GTGCCGGCGC CTATATTTGT GGAGAAGAAA
CGGCTTTGAT TGAAAGTCTA GAAGGCAAGC AAGGAAAACC TCGTCTCAAG CCTCCGTTCC
CGGCGGGTGT CGGTTTGTTT GGATGCCCCT CGACGGTAAC CAACGTGGAA ACCGTGGCCG
TGGCCCCGAC GATTCTTCGT CGCGGTGCGT CCTGGTTCGC CTCCTTTGGG AACGAAAACA
ACCGCGGCAC CAAACTCTTT GCGATTTCCG GTCACGTCAA GAACCCCATG GTCGTGGAAG
AAAGCATGTC CATCCCGCTC CGTGACTTGA TTGACAAACA TTGCGGTGGT ATGCGCAACG
GCTGGGAGTC CGTCCAAGCC TGCATTCCGG GTGGTTCCTC GGTCCCGGTC CTCAACAAGG
ACCAGTGCGG CGAAGCGCTG ATGGAGTTTG ACGACTTGCG CGCCAAAGGA TCTGGTCTCG
GTACGGCCGC TGTGACAATG TTCGACAACA CGGTCGACAT GGTGGGTGCC ATTCGTCGCT
TGTCGCACTT TTACAAGCAC GAGTCCTGCG GTCAGTGTAC ACCCTGTCGC GAAGGCACGG
GCTGGCTGGA AGATATTCTC ATTCGGATGG AAAAGGGAGA CGCCGACAAG CGCGAAATCC
CTATGCTTGA GGAAATATCC CGCCAGATTG AAGGCCACAC GATTTGCGCC CTCGGGGACG
CCGCCGCCTG GCCTGTACAG GGACTTCTGC GTCACTTCAA AAAAGATATC GAAGACCGTA
TTGACAATCC AAAAGGCTTT GATCACGAAG CCGCTTTTCA AAAGGCCTGG AGTGGCGATC
CTTTCGACAA CAACGCCTGG ACTAAGGAAC ACGGTGACGG CAAGACCTAC GCCGCGGCGT
AATAAAACGG AATTGTGCAA TGGATAAGAG TAGGAATATC GTTGACTGAA AATAC
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| Protein sequence | MMILSSTAAR ATAKALSRPG SRALASQAEH NLTSGFNFLS DQDRIFTNLY GEQDWRLPDA
IKRGDYHLTK EIMCMGPDWI IQEIKDSGLR GRGGAGFPSG LKWSFMPKET DGRPSFLVVN
ADESEPGTCK DREIMRKDPH KLIEGCILAG YAMRARAAYI YIRGEYFNEA VVLDEAIHEA
YAAGLLGKNA CGSGYDYDIY LHRGAGAYIC GEETALIESL EGKQGKPRLK PPFPAGVGLF
GCPSTVTNVE TVAVAPTILR RGASWFASFG NENNRGTKLF AISGHVKNPM VVEESMSIPL
RDLIDKHCGG MRNGWESVQA CIPGGSSVPV LNKDQCGEAL MEFDDLRAKG SGLGTAAVTM
FDNTVDMVGA IRRLSHFYKH ESCGQCTPCR EGTGWLEDIL IRMEKGDADK REIPMLEEIS
RQIEGHTICA LGDAAAWPVQ GLLRHFKKDI EDRIDNPKGF DHEAAFQKAW SGDPFDNNAW
TKEHGDGKTY AAA
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