| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_43938 |
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| Symbol | |
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| ID | 7204369 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | - |
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| Start bp | 480081 |
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| End bp | 482001 |
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| Gene Length | 1921 bp |
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| Protein Length | 559 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002186355 |
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| Protein GI | 219113543 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0338655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTTGAA ACGCTTCAAG GGTACTCTAC CGATACTATT TACCAGGTTG TTTTGACAAA
AGCTTTCTCA AGGCTGGATT CAGACTCGGT TGAAGTCCCT TTGATCGAAA GGAACCATGG
TGTGGTCAAG GTCACCGTCC CGAGGACGTA TATGGTTGGC TACGTTTATG GCCTTGACGT
CCATGACGGG AAGTGGCTTT GTTTTACTGA CAAACGCGCA TACGGGACCT CATCATCATC
AGCCTCGAGG AGGTAGCAAT ACGAGCTTTC GACAAATCTC CGGGCCACCA TCGGCAACTT
CGACTTCTGT GTCGGCGCCT GCAGACGATG GAGCAGAAGA GATTGCCAAC AACATTTGCA
CCGACGAGAC GCCGAGTCGG CCGATTCCAC TGCAAGCCAC TAACGAGGCC GTTGCGAGCG
CCAAGATGCC TAAGGTGTGT TGGAAGCCCC CGATACCTTT TCGTGCTGTA CTCACCACCT
GCTGTTGTCT TTTGTATGGA CTATTTTCGT TCTGTGTCTA CCCTCGTCTA ACTAACGTAT
CTTCCTTTCG ACTCAACAGA ATCAAGGGGC GCTCAAAGTA TTGTTTTTGT CCGCCGATAC
CGGTGGTGGC CACCGCGCCT CGGCCGAATC ATTGGCAAAA CAGTTCCTCA TTCACTATCC
GGGCAGTACC TATGACCTAC TCGATGTTTG GACGGAAGAC GGGGTATATC CGTACAAAAC
ACTCGTGGAA TCATACAAAC ACCTATCAGC ACATCCGCAG CAGTGGAAAA TGCTCTATCA
TCTTTCCAAC ACGAGACCGT GGGAAGTGTT AATGGATTGG CACAGTGCGT TCATGTGCGA
AGCCAAAATT AGGGCACGGA TCGCCTCCTA TAATCCGGAC GTAATTGTAT CGGTCCACCC
CGCTATGCAA TACGTACCCA TGAAAAGCGT CCGGCATCTC TCTCGAGAGC GAGGCCGTCA
CATTCCTTTC TTCACTGTCG TGACGGATTT GGGATCTGGT CACTGTACTT GGTTTCAAAA
GCATCCTGAC AAGATATACA TTGCCTCGGA ACGTATTCGA CGCCTTACCA AACGACGGGG
TGGTACCGAG GATTGCAAAA TTGTTAGTAC AGGTTTGCCC ATTCGCCACG ACTTTGCTGT
TCACTCGAAG GCCATGGGCG ATCGCACAAC GCCATCGGGA CAGGCCTACG TACAAAAGAT
GAAGCTCGAT TTGGGATTGC CGGGCGACAA ACCTATGGTG CTACTCATGG GCGGTGGAGA
AGGAGTTGGG TCATTGTCAG AAATTGTTGA GCAAGTATAT CGATCACTAG TGTCGGAGGG
CGTGGACGCA ACTATTTGCG TCGTCTGTGG CCGAAACGAA AATTTGCGTC TCAGCTTGGA
ACAACGAGAT TGGGATGCTG TTTTAGAGGC ACGTCCCAAG TTCTCCAAAC GGAGATTTTT
CTCACGTATT CTTTGGCGTC GGCGACGCAG TCGTCGGTTG CAGGAATCAT TAGATCGAGC
TGAAGCGTAT CAACACGACA GACCAGATTT GGTCAACGCG AGAGCCACAG TGGATGTGAT
AGGCCTCGGC TTTGTTACGC GCATGGCTGA ATACATGGTG GCTGCTGATG TCTTGGTCAC
TAAGGCCGGC CCAGGAAGCA TTGCCGAAGC TGCATCGGTT GGCTTGCCTA TTATGTTGAC
GAGCTTCTTG CCAGGACAAG AAGCTGGCAA CGTTGACTTC GTCCTCGACG CGGGCTTTGG
GGACTACAAT GGCGACCCTG TTGAAATTGC CCAAGAACTC ACAATATGGC TGAAAGATCG
CAAGTTACTA GTCGCTATGA GCAAAAGCGC ACAAGGCTCT GGACACCCTA CCGCCGCGGA
AGACATTGTT CTTGATATTG GTGAGACAAC GCGTGCTTGG ATGCTTCTCA ACAATAAGTG
A
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| Protein sequence | MVWSRSPSRG RIWLATFMAL TSMTGSGFVL LTNAHTGPHH HQPRGGSNTS FRQISGPPSA
TSTSVSAPAD DGAEEIANNI CTDETPSRPI PLQATNEAVA SAKMPKNQGA LKVLFLSADT
GGGHRASAES LAKQFLIHYP GSTYDLLDVW TEDGVYPYKT LVESYKHLSA HPQQWKMLYH
LSNTRPWEVL MDWHSAFMCE AKIRARIASY NPDVIVSVHP AMQYVPMKSV RHLSRERGRH
IPFFTVVTDL GSGHCTWFQK HPDKIYIASE RIRRLTKRRG GTEDCKIVST GLPIRHDFAV
HSKAMGDRTT PSGQAYVQKM KLDLGLPGDK PMVLLMGGGE GVGSLSEIVE QVYRSLVSEG
VDATICVVCG RNENLRLSLE QRDWDAVLEA RPKFSKRRFF SRILWRRRRS RRLQESLDRA
EAYQHDRPDL VNARATVDVI GLGFVTRMAE YMVAADVLVT KAGPGSIAEA ASVGLPIMLT
SFLPGQEAGN VDFVLDAGFG DYNGDPVEIA QELTIWLKDR KLLVAMSKSA QGSGHPTAAE
DIVLDIGETT RAWMLLNNK
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