| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_43937 |
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| Symbol | |
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| ID | 7204168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | + |
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| Start bp | 476811 |
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| End bp | 479810 |
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| Gene Length | 3000 bp |
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| Protein Length | 999 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002186068 |
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| Protein GI | 219112969 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.499306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTGT ATATTGAGCC TAACAGATGT CACAGCGGCT CGCCACGCCA AAGGGTGGGT
AACCCAACCC TCGAGAACGT GGCGGAAGAA ATGCTGAACG GGCTCTTCTG CCATTACGAG
CCTCCCGACC AGTCTCGGCG AGATCGAAGT GATTCGGGCC TGACCAGGTC CATCCTCCTC
CCTCCTCGTG ATTTCCGCCA GCAAAGTGTC CGCTCTAAAA AAGAAGTGCG TTGGTCCGAC
AGTATCAAAG AATCGCAAGA CAACGGGTCT CCCAGAGCGA TTCACTGCAA CGTCGGTTCA
CACTGCGTCG ACGCTGGCAT CGAAGCCGGA TGCGTCGACC CTGAACACAA GGGAGTTACC
CGCGATTACT TTGCCAAGTA CGACTACGAT TTGCAGCAAG TCGACAGTAC TGAAAGTGGC
GCGCCGTTTC GTCCTTCTTG TCTCCACAAG AATGTAGTCT TTGATGACGA CGGGAACCCG
ATTGCATCCG TTCCCGGGAC CCCGATCCCT ACGCTCCCCC CTCTCCCTCC GCTTCCATCC
AGGAGGGAGC GATTTATTCC CGAGCTTTGT GGTATTGGTA TCAATTGTGG CGAAGACGAA
GAGGAATTGC GTGAGATGTG CGCTTCCAAG CCGTATCGTA GGCCTTCGCA ACCGTACGAC
TACTCCGAAG ACGATGAAGA CAACTCTCTT CTTCTTGAAG AAAACAACTA TGAAATTCAA
GGAAGGGCAA CATTCAAGAC TCGCGGGCGC AAATCTCTTC CCACCCCCGC CTCCAGTCCG
CCCACCGAAA CCAAGTCGTC CCCAACAAAG AACAACGTAA ATGGATCAAC ATTACACGAG
GCCGACTGGG AGACTACTTC CAACGCATCC TCGTCACTGT TTCGCCGTAT ACTTCCTCGT
TGGAAACGTA ACGGCAGCAA GCATAGAGAA GCAGTTTCTG AAGAGCAGGC AGTTCTCGAT
CCAATTGAAC GGCAGCGGGC AGAAGACAAT AGAAAGGCTG AAAAGGCTTC CTTCTTGCTT
AAGGATTCGA AACTAAGAGC TTCGCAAGCA TCCACATGCG AAGAAAACAA CGACTGGGAC
GACATTGTAC CAGTCGCTCC ACTTTTGAAA ACGGAAATTT CGAGTCAGCT CCCTCATAGG
CCCGCTGCGT GTCAACCCAC TAGTAACGCC GCTGCCCTTT ATACCGTTCC AAAATTGGAA
GCAGCAAAGC GCGACCCGTC TCCTAGCCGG GGGCGAGGCC GCAGTGATAG TCTCGACAAG
AAAGAGAAAC CCAGACGCGG TTTTCTGAAA CGACGAAAGA GATCCAAGTC GCCCTCGTTG
CCCGGAAATT CTTTAGTTGT CTTGAACGCG CTTCAAGATA AAACCGACTG TGAGCGCAAA
AGTGCCATTG TGGCTCACAG GCAAGGACTA AATCAAACGG GATTGCAACA GCCTCTTCCG
ATGGGAAAAA ACCCTTATCA GCCTTCTCCA GCAAACCCAT CCCGTGAAGA ACTTCTTCTC
AAAAGGCAAC AACAGAAATC TGCATCTATT CCTCCAAATT TGATTTCGAG GGAACATGTG
GACCAACAAC AACCGCCAAT CATACAACAG CAACGCAATG CTTTGGCGCA ACCGCAGTTA
ATCCATGATT CTCGCTTTCA TCCAGCACAT CCTTTGAATC GTTCTGTTAG CGGCAGCAAT
GGCAACAGTC ATTCTCTTCA TGCAACCCAC AAACAGCTTG TGGATGCAGT AGATGATCGA
ACAGAGCGAA TGAGTTTCAT TGCAGCTCAC CGTCAGGGCT TCGATGAAGA CATAAGGGTG
GCCACTCTCG CCCAGTCCTC CCGTCACGAT GTACCAGACT GTCTTGACGA TCAAATGGAG
AGAATGAGTT ACATCACCGC TCATCGTAAG AGTTTTGGCG ACGGGTCATT TCATTCTGCG
AAAACGCCGT CGCAGATGAC ATTGATACAT GAATGCCAGC CTCTTGCAGA TTACCGCGGA
GGTATACCAT CGACCGGGCG TCATTATTCT CCCCACGATC AACGCATTTC CTTAGAGCAA
CCTTTCAAAG ACAAACGGAA AATAACAAGG GTGGAGCAAA AAGCTCTGAA GAAGCTCGAT
AGGGAACAAC GCAACGAAAT GCGAAGCGTA GAGCGCTTGA TTCGAGTACG TAATCCTACG
CAGCACTTAA AGACTTTAGG GTCATCGAAT CCGCAAAATT CGGCCATATT CCGAAAAGTT
GATGTACCCG CTCGAAGTCC AAGCCATCAA TCTTCCTACC AAGAACCACC GTTGCCTTTC
CGTCCAGTTG AGAATGTGGA TCAAACCAAC CCCAGCCAAG ATCCTCCAGT CCAGACCACT
GGCTCTTTTG AAAAGTTTGA GGGAGAGAAA CCTATTGAAA CTACTTGGGA GGAAAGAACA
CGATTAGCTT GGGAGCGTCT GCGGGGAAGC TTCACCATGG AGAGCGCGAC GGAAAAATCC
AACGAAGAGG CCCAACTGTT ACGCCCGCCT ATATCGAACC AGTCGCCCTC CCAGCAAGTA
CGGGGCATTC TGAAGATACC GTCGCACGAG AAGCGCGTGA CCTTCGGTCA AGACACAGAA
CACATTTTTG ACAAGGCAGA AGAGAACATA CCAATGCAGA GTGAAAACGG GTCTTACGTT
CAAAATACCG GTAGGCTATC CACGACAATG CCACAGCCAC TGGGTATGGT CGACCTTACG
GATCAGCACG GTCGAGTCAC CATGCCATCC ATGTATCCCC AGAACCTGCC ACCCATTTCA
TCCAGCAAGA AAACAAAAAA AGTCTTTCGC GGCGCAAGGA TTTTCAGCGA ACTATTTCGA
AAAGGGAAGA AGCGTAGCAG CCGTAGCAAA ATGACAAAGG GATCGTTCCG AGTCAACCCT
ATGGAAATCG TCAATTCACT CTCAACTGAA ATTACCACCC CGTCTATCTC ACGTTCTGGG
GATGAGTATG ATATGCTTGG AAATACCGCG ATGGGCTACA ACGTAATGCA CGCCGTATAG
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| Protein sequence | MALYIEPNRC HSGSPRQRVG NPTLENVAEE MLNGLFCHYE PPDQSRRDRS DSGLTRSILL
PPRDFRQQSV RSKKEVRWSD SIKESQDNGS PRAIHCNVGS HCVDAGIEAG CVDPEHKGVT
RDYFAKYDYD LQQVDSTESG APFRPSCLHK NVVFDDDGNP IASVPGTPIP TLPPLPPLPS
RRERFIPELC GIGINCGEDE EELREMCASK PYRRPSQPYD YSEDDEDNSL LLEENNYEIQ
GRATFKTRGR KSLPTPASSP PTETKSSPTK NNVNGSTLHE ADWETTSNAS SSLFRRILPR
WKRNGSKHRE AVSEEQAVLD PIERQRAEDN RKAEKASFLL KDSKLRASQA STCEENNDWD
DIVPVAPLLK TEISSQLPHR PAACQPTSNA AALYTVPKLE AAKRDPSPSR GRGRSDSLDK
KEKPRRGFLK RRKRSKSPSL PGNSLVVLNA LQDKTDCERK SAIVAHRQGL NQTGLQQPLP
MGKNPYQPSP ANPSREELLL KRQQQKSASI PPNLISREHV DQQQPPIIQQ QRNALAQPQL
IHDSRFHPAH PLNRSVSGSN GNSHSLHATH KQLVDAVDDR TERMSFIAAH RQGFDEDIRV
ATLAQSSRHD VPDCLDDQME RMSYITAHRK SFGDGSFHSA KTPSQMTLIH ECQPLADYRG
GIPSTGRHYS PHDQRISLEQ PFKDKRKITR VEQKALKKLD REQRNEMRSV ERLIRVRNPT
QHLKTLGSSN PQNSAIFRKV DVPARSPSHQ SSYQEPPLPF RPVENVDQTN PSQDPPVQTT
GSFEKFEGEK PIETTWEERT RLAWERLRGS FTMESATEKS NEEAQLLRPP ISNQSPSQQV
RGILKIPSHE KRVTFGQDTE HIFDKAEENI PMQSENGSYV QNTGRLSTTM PQPLGMVDLT
DQHGRVTMPS MYPQNLPPIS SSKKTKKVFR GARIFSELFR KGKKRSSRSK MTKGSFRVNP
MEIVNSLSTE ITTPSISRSG DEYDMLGNTA MGYNVMHAV
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