Gene PHATR_43931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_43931 
Symbol 
ID7204324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp455174 
End bp456028 
Gene Length855 bp 
Protein Length279 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186349 
Protein GI219113531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.030953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTAA ACGAATCGAA GGCCGCGTCC TTGATTCCTA GAACGCTCGG CGACTCAACG 
TACGCGTTGC GGGCATCTCC AACCATTTCT AGGACAAGAG CTATTTTTAA GGCAGCCGGT
TCCATTGTTG CCCTTCCACT TATGGTGCCA ATGAGTTTGA TCTGGTCAGC TGCCATGGCG
ACACCTTTGC GTGATCATCT CATGGGAATC GTCATCCCAC GTGTCATGAC AATGGTTGAC
AAAGAATTTC ACGACGAACG GGCGACACTA TTAGCCGACG TTTCAGGCAA GGTGCTAGAT
GTTGGTAGTG GCGGCGGAGC GTATTTGAAG TACTGTCGAA ATGCTGATGA AGTTATTGCT
GTGGAACCGA TCCTTGATCT TCATCCAAAA ATACAAAAAT CAGGCCAAGA TGTGAAAAAA
TTAACCATTG TCTCTCAATT GGAGGATATA CACGACGACG AGTTGTTTGA TTGGGTGATT
TTTGGTAATG TCTTGTGTGA AGTTCCGGAC GTTCCAAATA CCGTACGAGA GGTTGATCGA
GTTCTGAAAC CAGGAGGACG GGTTTACTTT TCCGAACACA TTGCTCGACC TCAGGGAGAC
TGGCGACGAA CATGTCAAGA CATGGTGAAT CCTGTGTGGC GGCATATGGG TGGGGGTTGT
AACTGCAATC GCGATAGTCT CAAGATATTG GAATCTCAAC CTGGCTGGGC AGTGGTGTCT
TGGAAGTATG AACACATCCA GGTAGGAATG GGACCCTTCG TTCTTGGATT AGCGATGAAA
TCTCCCCCAA ATCACACTCC AGAGTTGGAG TCAAGAAGTC AACAAAATAC AGTAAGCTAG
TACGACTCTG AATAT
 
Protein sequence
MIVNESKAAS LIPRTLGDST YALRASPTIS RTRAIFKAAG SIVALPLMVP MSLIWSAAMA 
TPLRDHLMGI VIPRVMTMVD KEFHDERATL LADVSGKVLD VGSGGGAYLK YCRNADEVIA
VEPILDLHPK IQKSGQDVKK LTIVSQLEDI HDDELFDWVI FGNVLCEVPD VPNTVREVDR
VLKPGGRVYF SEHIARPQGD WRRTCQDMVN PVWRHMGGGC NCNRDSLKIL ESQPGWAVVS
WKYEHIQVGM GPFVLGLAMK SPPNHTPELE SRSQQNTVS