Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_43931 |
Symbol | |
ID | 7204324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 455174 |
End bp | 456028 |
Gene Length | 855 bp |
Protein Length | 279 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186349 |
Protein GI | 219113531 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.030953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGTAA ACGAATCGAA GGCCGCGTCC TTGATTCCTA GAACGCTCGG CGACTCAACG TACGCGTTGC GGGCATCTCC AACCATTTCT AGGACAAGAG CTATTTTTAA GGCAGCCGGT TCCATTGTTG CCCTTCCACT TATGGTGCCA ATGAGTTTGA TCTGGTCAGC TGCCATGGCG ACACCTTTGC GTGATCATCT CATGGGAATC GTCATCCCAC GTGTCATGAC AATGGTTGAC AAAGAATTTC ACGACGAACG GGCGACACTA TTAGCCGACG TTTCAGGCAA GGTGCTAGAT GTTGGTAGTG GCGGCGGAGC GTATTTGAAG TACTGTCGAA ATGCTGATGA AGTTATTGCT GTGGAACCGA TCCTTGATCT TCATCCAAAA ATACAAAAAT CAGGCCAAGA TGTGAAAAAA TTAACCATTG TCTCTCAATT GGAGGATATA CACGACGACG AGTTGTTTGA TTGGGTGATT TTTGGTAATG TCTTGTGTGA AGTTCCGGAC GTTCCAAATA CCGTACGAGA GGTTGATCGA GTTCTGAAAC CAGGAGGACG GGTTTACTTT TCCGAACACA TTGCTCGACC TCAGGGAGAC TGGCGACGAA CATGTCAAGA CATGGTGAAT CCTGTGTGGC GGCATATGGG TGGGGGTTGT AACTGCAATC GCGATAGTCT CAAGATATTG GAATCTCAAC CTGGCTGGGC AGTGGTGTCT TGGAAGTATG AACACATCCA GGTAGGAATG GGACCCTTCG TTCTTGGATT AGCGATGAAA TCTCCCCCAA ATCACACTCC AGAGTTGGAG TCAAGAAGTC AACAAAATAC AGTAAGCTAG TACGACTCTG AATAT
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Protein sequence | MIVNESKAAS LIPRTLGDST YALRASPTIS RTRAIFKAAG SIVALPLMVP MSLIWSAAMA TPLRDHLMGI VIPRVMTMVD KEFHDERATL LADVSGKVLD VGSGGGAYLK YCRNADEVIA VEPILDLHPK IQKSGQDVKK LTIVSQLEDI HDDELFDWVI FGNVLCEVPD VPNTVREVDR VLKPGGRVYF SEHIARPQGD WRRTCQDMVN PVWRHMGGGC NCNRDSLKIL ESQPGWAVVS WKYEHIQVGM GPFVLGLAMK SPPNHTPELE SRSQQNTVS
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