Gene PHATR_43913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_43913 
Symbol 
ID7204356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp409962 
End bp411046 
Gene Length1085 bp 
Protein Length330 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186339 
Protein GI219113511 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.922098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAAGTGACAT GTTGTGGTCA GTCTTCTGAG TCGTCGTTCA GAGCCGACAT TCAGATCAAC 
GCCGTCGAGT TATCTCTCCT TCGCCGAGTA GAATGGTGGA GGACGAGGGG AGAAGAACGC
AAGCGGCAAA CTGGCATGGA TCGATTCCGG TAGTTCTGAC GCTGTCATCC CGTTCGCTCT
CGTCGCCGAC CATGCCGCCG CCCATTCATG TTTTGGTTCC TCGGAATACG TATTTACACG
TCGGATTACA AACCGCGGTT AACCGTCTAC ACAGATTTGC TCCAACGACC TTGTCGTTTG
TTTCCGGCAT GATCCAAAAG GAACCCGATC CGGGGGCATC GACGTTCGCG GAAGACGACG
AAAATGACCA AGCCGACACC AACACCGCAT CCCAAACCCC ATCCGACTCC GCAATTGGAA
GAGCCGCTGA CGAAAGGTAT CCTGTTTGTT GGTTTGAAGA CGAAGACACG CAGTTCGCGC
TACGCTGGCA TTTGTTCGCG GGAGTCTTGT ACGACACGAA ACGAGCAAAG GTACCATCCG
CTTCCTCGTT GCCTTGGAAA ATTCGTTTGC ATTTTACGGC CTACCCGACT AGCCAAATCC
TCCCTTTGGA GGCCGACCGA GTCTTGGTGC AAATTCAAAA CTTTTACAAA AATTCCGTGA
AACAAGCTTT GTGCTTGCAG TATGGCAACT CCAAAGCAGC CATGAATCTG ACGAAAGAAT
CGCACTTTCG CTTATGGGAT GCCGTATTGA CGACAACCTA TCCACTCCAT CGCCAAGTAA
ATGATGACTT ACCAACACAA ACACAAGAGA CAATATCGCA AATTCCTGTT CGAGTGCTAG
TGAATGCTGC ACGGCCACCA ATTCAGCGAG CGTGTCGCGA TTCGTCCGTC CAACTTGGAG
CGTTGCTATC CCAGTGGCTC CCGGACTATT TTGAGACTGT AAATGACACG GCACAGGCCA
AGGACCAGGT GGTTCAGTGG CGCGTGGGTG GAATTCAACC CGGGCTGGAA CTGCCTGTTT
TCCAATTGTG GAAGGCACTC TGTCATCCAG ATTATTTTTT GTACGTCATT GTTTTGACCA
ACTAA
 
Protein sequence
MVEDEGRRTQ AANWHGSIPV VLTLSSRSLS SPTMPPPIHV LVPRNTYLHV GLQTAVNRLH 
RFAPTTLSFV SGMIQKEPDP GASTFAEDDE NDQADTNTAS QTPSDSAIGR AADERYPVCW
FEDEDTQFAL RWHLFAGVLY DTKRAKVPSA SSLPWKIRLH FTAYPTSQIL PLEADRVLVQ
IQNFYKNSVK QALCLQYGNS KAAMNLTKES HFRLWDAVLT TTYPLHRQVN DDLPTQTQET
ISQIPVRVLV NAARPPIQRA CRDSSVQLGA LLSQWLPDYF ETVNDTAQAK DQVVQWRVGG
IQPGLELPVF QLWKALCHPD YFLYVIVLTN