Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_43913 |
Symbol | |
ID | 7204356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 409962 |
End bp | 411046 |
Gene Length | 1085 bp |
Protein Length | 330 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186339 |
Protein GI | 219113511 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.922098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AAAGTGACAT GTTGTGGTCA GTCTTCTGAG TCGTCGTTCA GAGCCGACAT TCAGATCAAC GCCGTCGAGT TATCTCTCCT TCGCCGAGTA GAATGGTGGA GGACGAGGGG AGAAGAACGC AAGCGGCAAA CTGGCATGGA TCGATTCCGG TAGTTCTGAC GCTGTCATCC CGTTCGCTCT CGTCGCCGAC CATGCCGCCG CCCATTCATG TTTTGGTTCC TCGGAATACG TATTTACACG TCGGATTACA AACCGCGGTT AACCGTCTAC ACAGATTTGC TCCAACGACC TTGTCGTTTG TTTCCGGCAT GATCCAAAAG GAACCCGATC CGGGGGCATC GACGTTCGCG GAAGACGACG AAAATGACCA AGCCGACACC AACACCGCAT CCCAAACCCC ATCCGACTCC GCAATTGGAA GAGCCGCTGA CGAAAGGTAT CCTGTTTGTT GGTTTGAAGA CGAAGACACG CAGTTCGCGC TACGCTGGCA TTTGTTCGCG GGAGTCTTGT ACGACACGAA ACGAGCAAAG GTACCATCCG CTTCCTCGTT GCCTTGGAAA ATTCGTTTGC ATTTTACGGC CTACCCGACT AGCCAAATCC TCCCTTTGGA GGCCGACCGA GTCTTGGTGC AAATTCAAAA CTTTTACAAA AATTCCGTGA AACAAGCTTT GTGCTTGCAG TATGGCAACT CCAAAGCAGC CATGAATCTG ACGAAAGAAT CGCACTTTCG CTTATGGGAT GCCGTATTGA CGACAACCTA TCCACTCCAT CGCCAAGTAA ATGATGACTT ACCAACACAA ACACAAGAGA CAATATCGCA AATTCCTGTT CGAGTGCTAG TGAATGCTGC ACGGCCACCA ATTCAGCGAG CGTGTCGCGA TTCGTCCGTC CAACTTGGAG CGTTGCTATC CCAGTGGCTC CCGGACTATT TTGAGACTGT AAATGACACG GCACAGGCCA AGGACCAGGT GGTTCAGTGG CGCGTGGGTG GAATTCAACC CGGGCTGGAA CTGCCTGTTT TCCAATTGTG GAAGGCACTC TGTCATCCAG ATTATTTTTT GTACGTCATT GTTTTGACCA ACTAA
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Protein sequence | MVEDEGRRTQ AANWHGSIPV VLTLSSRSLS SPTMPPPIHV LVPRNTYLHV GLQTAVNRLH RFAPTTLSFV SGMIQKEPDP GASTFAEDDE NDQADTNTAS QTPSDSAIGR AADERYPVCW FEDEDTQFAL RWHLFAGVLY DTKRAKVPSA SSLPWKIRLH FTAYPTSQIL PLEADRVLVQ IQNFYKNSVK QALCLQYGNS KAAMNLTKES HFRLWDAVLT TTYPLHRQVN DDLPTQTQET ISQIPVRVLV NAARPPIQRA CRDSSVQLGA LLSQWLPDYF ETVNDTAQAK DQVVQWRVGG IQPGLELPVF QLWKALCHPD YFLYVIVLTN
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