| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_43904 |
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| Symbol | |
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| ID | 7204310 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | - |
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| Start bp | 387855 |
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| End bp | 390089 |
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| Gene Length | 2235 bp |
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| Protein Length | 696 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | phytoene desaturase. zeta-carotene desaturase. bacterial-like protein |
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| Protein accession | XP_002186335 |
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| Protein GI | 219113503 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.476322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCAC GTGTTTGTCA CTTTCGCTTC CGATGGGATC CTTCGGGAGA TCCATCCAAA
ATTCGTAATT TGGTGATGCG GAGCCGCCAA TCCAGTCGGC GTCCAGGGCA CGCGCACGAA
AAGGGATCGG CGAGAGTGAC CCAAACGGCC GGATTGTTTG CCATGCGCGA TGCACTGGGT
ATCTTGGCGC TAGCATGGTG CAGCCGGAGT AGGAATTCGT GCTCGTCGTC TATTGCCGTC
GGCTCCTTTG CGAGTCCCCT TTCTCCGCCT CCCGGGAGGA ACCGAGCCAC GCAGCGGCAA
CTAGTGGTGG CCCACCAGAC CAATTCCCAA CAATCTGTCG TTGGGGGTAG CACAAGAAAA
TCACGCCGTG TTGTCGTCGT GGGTGGGGGA GTCGGTGGGT TGGCTACGGC GGCTCGTGTT
GCGGTAGCTT CGCCGTCTAC GGAAGTCATC ATTTTGGAAA AGAACGACTT TGTTGGAGGC
CGTTGTGGGT CATTCAACGT CGATGTGCCC GGAAAAGGAA CATTTCGTCA CGAACGAGGA
CCCAGCCTGC TACTTTTGCC TCATGTCTAC CGGGAAATTT TCGAATATTG TGGGAGTACA
CCGGAAGAGA ATGGGTTGGA AATGAAACAA TGCACTCCGG CATACCAGGT AGTCTTTTCG
GACGGAGACT GTATTCAACT GGGTTTTCCC CGCGCATCAG ACAAGGTTGA AAGATCCGAA
GAAGAATTGA AGTCGCGGAG GAAAATGGAC ACTTTTGAAA GGAATGGAGC CGCAAAATGG
GATGCCTACA TGAAGACCTG TGAAGCGTTC CTTGATTGTG GGCTACCAAA CTTTATCGAG
CAGCGTCTTG ACATGAAAAG TTTCCCTGCT TTTATTCGAG AAGCACTCAG GGACTTTGGT
AAAGGGTGGC CGTTAAAACC CCATTCGGAC GTTTTGGATT CTTTCTTCGA GTCCGACAAG
ATGCGTGCCA TGGCTTCCTT CCAAGATTTG TACGTCGGGC TTGAGCCCTA TCGCAACAAT
CAACTACTTG GGGGAGGCGT TCTGACTACT ACTGCACCTG CCGTATTTGG TCTTTTGGCT
GCGATTGAGC TGCATCCCAC GAATGCAAAG TGTGGTGTGT ATGCTCCAAT CGGAGGCTTT
CAGGCCGTTT CTTTGGCATT GGAAAAGCTG GCAAGATCGT GCGGAGTAAA GACTCTTACT
GGTAGAGCTG TATCTGAGGT AACCGACGAA GGGGTCTTCT ATGTAGAAAC ACAAGCAAAT
GCTACAGAGA CAAAGTTTCT TTCTGCTGAC CTGGTGGTGG TCAATGCGGA TTTCCCATAC
GCAACGCAAA GTCTTATTTC AAAATCGGAA ACCAGGTACA GCCCCCGGTT TGACTGGGAC
GACCGATTTC TCTACAGCAG CGGCGTTATT GCATTTCATT GGTCGGTCGG TAGATCTCTG
GATGATCTTT ATACGCACAA CGTCTTCATG GTGAGTGGTA GTCGCAAGAA GGTTGAAGAA
AGCTGGAGTG TTCTGCGAGA TGCTAGTACA TCCTCCTTTG ATTTTGAGGA TGCCGAGTTT
AACTTTTACG TTCATCGACC AATGGCGACA GATTCCACGG CTGCTCCCCA GGTAAGACGA
TGAAAACTCG AAGAATGTCA AGAAATGTAT GCCTTTAATT TTTTGTTGAA TTTTTGCCAG
GGGCTCGATG CGATTCTGAT TCTCGTTCCA TGTCCAACAC TTCTACGTGA CCCTGCCAAT
ATGCATTTGA GTCGGGATGA GTCGATTGCA GCGTATAAAA ATCAGATTAG TGAAGGAAGT
ATCAACATTT TACGGCGCAA AGTCATCCAA CGCCTGACGG CAATTCCTTC CTTGGCCACC
TTTGGCTCGG ACGATATTCT GGACGAGCAC GTGGACACAC CCGGCACGTA CGCCGATCGG
TTTCATTGTG GGGCAGGGTC CCCTTTCGCG CTAAGCCACG GATTCAAACA ACTCAGCCTC
GCTAGACCTG GTCCTACGTC CCAGAAACAC CATAAGCTTA TCTTCACAGG AGCAAGTGTT
CGACCGGGAA ACGGGGTTCC TTTGGTGCTG ATTGGTGCCA AGGGGGCTGA AGAGGCCATT
TTGTCCAAGC TGAGGGATAC ATCAAAGGAT GTTCAGTGGG AAAGCAAAAA TGCCTGGTAG
GAAAAACTAT TATATGAGCA GCCGTGTTTG GGCCACTATC TTCTAGATAA ACCCGGCAAA
TAGCTCTGAT GTAAA
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| Protein sequence | MQSRVCHFRF RWDPSGDPSK IRNLVMRSRQ SSRRPGHAHE KGSARVTQTA GLFAMRDALG
ILALAWCSRS RNSCSSSIAV GSFASPLSPP PGRNRATQRQ LVVAHQTNSQ QSVVGGSTRK
SRRVVVVGGG VGGLATAARV AVASPSTEVI ILEKNDFVGG RCGSFNVDVP GKGTFRHERG
PSLLLLPHVY REIFEYCGST PEENGLEMKQ CTPAYQVVFS DGDCIQLGFP RASDKVERSE
EELKSRRKMD TFERNGAAKW DAYMKTCEAF LDCGLPNFIE QRLDMKSFPA FIREALRDFG
KGWPLKPHSD VLDSFFESDK MRAMASFQDL YVGLEPYRNN QLLGGGVLTT TAPAVFGLLA
AIELHPTNAK CGVYAPIGGF QAVSLALEKL ARSCGVKTLT GRAVSEVTDE GVFYVETQAN
ATETKFLSAD LVVVNADFPY ATQSLISKSE TRYSPRFDWD DRFLYSSGVI AFHWSVGRSL
DDLYTHNVFM VSGSRKKVEE SWSVLRDAST SSFDFEDAEF NFYVHRPMAT DSTAAPQGLD
AILILVPCPT LLRDPANMHL SRDESIAAYK NQISEGSINI LRRKVIQRLT AIPSLATFGS
DDILDEHVDT PGTYADRFHC GAGSPFALSH GFKQLSLARP GPTSQKHHKL IFTGASVRPG
NGVPLVLIGA KGAEEAILSK LRDTSKDVQW ESKNAW
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