| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_43902 |
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| Symbol | |
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| ID | 7204351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | - |
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| Start bp | 377576 |
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| End bp | 381938 |
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| Gene Length | 4363 bp |
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| Protein Length | 1416 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002186333 |
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| Protein GI | 219113499 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.279249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTTATTGCT ATGGACGCTG ATTCAACAAA AAGACGGGCG AGTCTGAAGC GTTCACGTGT
AGCGATTGAT TTTCCTCATG GTCGCACATC AGCAAAGAAA CAAACGGTGG CGAAGCCGGA
CAATGCCCAA TGCAGCTATG TTCCTGTATT CGATGAGCCA AATCAGCATC TCAAGGCGCT
TTCCTCTCAA AATTTCTGTT CGATGAGAAA ACCAAGCTCT CCCTCCTCGC TCTCCAGGAC
GAAAAACAAC GCCTCTTGTC ATCACATGGA AAATGCTCAC GATCGCAAAT GGGCCCTAAG
TTTTGAGAAG CTATCGGAGT ACAAATCTCG TCACGGAGAT ACCCTTGTTC CGAAAGATTA
TATATCAGGA GGGGTCCCAC TGGGAAATTG GGTAAGAAGG CAACGCTACC TTCAAACAGC
AAAGCTCAAG GGATCTAAGA CCCCGCTCAC TCAGAGCCGA ATTGAAAAGC TCAATTCTCT
TGGCTTTGAT TGGGATACCG TGTCGAAGAG GGTGTTTGTA CGCTGGGAAG AAAACTTTGA
GCGCTTAATC AAGTACAAAG AAACGCACGG TGACACTCGA GTACCGAGCA ACTATCGTAT
TGATGACGTC AACTTGGGAA ACTGGGTAAG ATCTCAACGC GCTGCATACT CTATGAAAAC
AAGGGGTAAA TCAGTGGTCA TGAACGACGA GCGTATATAT AAGTTGAATT CCATCGGTTT
TCAGTGGGAT CTCCAATCGC GATTGTCGGG TTGTTGCATT GGCGGCTTCA CGGAACTTCC
GTCCTTAGCC GATCAGACGA TAAAAGAGCT GGAAGTAGTT TTCCTGCAAA ACCTAGATCG
AGAAATATTG ACCGCAGAAG AGGTACATTT TATGGAGAAG CTAGAAAAAG CGATAATCAT
AGAAGAAGAG AAGTCGCTTC TACAGCGCAT TGACGAAGAG GTCACCAAAG CCGAGGTCTG
TTTACTCGAT GAGACTCCAC GTGTTCCAAA ACGAACTTTC ACGAGAGTGG GGAGAAGTTC
GGAGCTTATG AACGGTTCTC ACTCGCCAGC CATTCAAAAT GATTCACAAC TTTACACTAC
CATGGCGGTT GATAGCGCAA CTCTCTACTT TCCCAAGCAT TTGAAAGGAA ATATATTGAT
CTCGAGGGAA GAATTTAATT CTGAACTTTT ATTGGCTTTC AAAAAGGAAT GCACCGAACT
TCTAGATGGA TTTACCACAA GCATGCAAGT CTGTCAAGCT CAGTCTGACA CGTGGAAATT
GACTGTTCAA GGTCAACCAG AAGCTCTACA GAAGCTCTCC CAGATACTCA AAGCTTGGAT
TCACAACAAA ATAAACGCTT TTAACTATTT ACTCCTCGTT TCAGAGGGGA GGGAGGTAGA
GGTCCAAATG AAGTGTACAG CGCAGATTGA AGCAAAGCTG GTTGAAACAG CATGGAATAC
GAATGGTGTG AAAAAGCAGG GCTTGCTCAT TCAAGCTCTT TCGTCGAAAG GACAGCTGGG
AAAGGCTCTA GGAGAGCAAG GAACTTCTTG CGGTGCTGCT GTTGTATCCA TTGAAAAGCA
AGAGTGCTCC TCGATTGCCC AATTTAAAGA CTTGGTCAAA AATACAGGTG TGAACAATGC
ATCGTATAAA CTGCAACTGA TGCTGCATCC TGAATCTTTT CAGGTTGTGG AGCATGAAGG
GGGTATGATG AATACTGCAG AATCCCATTA TGGTATCGTG GAGAACTTCA AGTTTGTAAA
TCAAGACACT CCTTCGGGGT CTCGTCGTAA AGCAATATGT CCATCTACTG CTTCAGCCAC
CTCAGGCTCT TATGAGAGAA AGGAATACGT TTTTAAATTT CCTAGTGGAG AAAAGCTTGG
GTTTTATTGC AAAAACGACC GCAGTGGAAA GTCTCCAGTG TGTCGTATCT GTTCCGTTTG
TCCGAACAGT ATCACGGCAA AAGACTCAAG AGTCCTCCGA GGCACAATCG TTGTTTGGGC
TTCAGTGGGA AACGGAGATC GGTGTGCTGT CAGTAAATGG CAGGACTTAG CGATTCTCTA
CACACAAGCA AGTCAGGGAC CTGCTGATTT GAATATCTGG TTTGTAAACC GACATGAGGG
AAAATTCGAC CATGACGGCT CAAGGCTGCT GGATAGCAAA GATTGGACAG ACACTGGGAT
CTGGAGAGGA AAAGAGAAAG CAGGCTGGGC AGGCGGGGAT CAAACGCACT GCTGTGAAAA
TCTTGATCCT CGAAGCGGTA CCGATCGAGA TGCGAATTCA AGCCTCCGTC CCGTCGCATT
AGCTTGTAGA CAAGAGGAAT TGGAGAGCAG TGAAGACGAG CAATGGTTCC TTTTAGATCA
TATGCCATCA ATTCGTGAGC ATGTGCGCTT GCATCCTGCG CTAAAAAAAG CAGGCTCAGC
GAAGAAGGGA AAGACGATCA GCTTTGACCG AAAGCTGTAC CAGGTAAGAA AGTTTGTAAG
GGACAGTAGA ACGTGTGAAT TCTACGTCCA GCGTAAGTTC CAAGCCAGTC CTGTTGCGTC
CCCTAGCTAC ACAATCCAAG TCGGCTCCAG TATCTCATTT GAAAGCAAGA TTTTACAAGC
AATAAAGAAG CACTCGTTTA AAGAACTAAT TCAAGTTCTT CAAAATGGAG CATTTGCTGC
CAATCGCTCA GTTGCATTTC TTGACACCGC ACGACGCGAA CTGAGGCTGG CCGTTGAGTC
AATGAAATTG GAGAATAGTG AATACTGTGG AAACCCACGG AACTCTCTTG TCCGAAGGAG
GGATTTGGAT CTCAAGCACA CAGTGTTGAA GGTGTATATA TCAGCCGCAC ATACATATGG
CCATGCGAGA GGTTTGAGGA ACTGGTCCAG GTTCGAGCTT CTGGTGAAAA GTATAGAAAA
TTTACGCCTT TCTCCGTCAC TCTTAAGAGG ACAAGGCGAG AGCTTTATTT CAGCCAAGTT
GAGTGCAATT TTTCCGGACT CTAGCAGCTC TGAGCAACTT GCGCCCCTTC CCCATCGTCC
TCTATCGAAT CTCGTCGAGT ATGGCAATGA GTTCAGCAGT TCTTATTTTT TGAATCACAA
CGCTAGTATT GCTGCGGGTC GATGTCTCGT AATTGAAATT CAAATGAATC CTTCTGAGGC
TAGCGGATCC TTCCGGCTCG GTTCCATGAA CGTCGAAGTG GCTGAACTAC AGGCTAACTG
CCCTCGAGAT GGATCCTGGT GGAATGTATC GAAGCAGATT TTGACTGGGC CCCATCTAGA
GGATGGAGTA GTCCATATCA ACGCCCGAAG GGTTGCTGTC GACCCTGAAT ATATCAAAGC
GAAACGACGT GACGGTTGTA TACGATTGAA AACAACCTGT GACTGGGCTT GCAAATTCAA
CGATAGCCTT TCTCCCATAG AGAGAGCGGG GGGTGTTTTA GATCTACATG TCCCCGTTTT
CGGTGGCGCA TCGCTCCTGC ATACTGCGAT TTTGCTTCAA GACTCACATC TGGTGAGGAA
GCTTCTTGAT CTTGGCCTAG ATCCGGGCAC CAAGTCCCAA ATTGGATCTC CGATGTCATT
GGCCTTCAAT CTAATTGAAA ATATTACACA TGCGTCCAAG AATAATGGAA TGAGCGGCGG
TGAGACACAT CACAACCACG CCGAACCGGG AGATCGCGCG GAAAACGACA GAGCAGCAGC
ACTAGCCAGA ATTAGTAAAA TGCTTTCTTC CAGGAACGAG CAGTCCAACA TACGCAGAGA
CGGTGCGGGC CTGTTGCAAA GAGAAGGCGC TTCTTTGGGA TTGCCTTCCT CAACACATTC
TACGATTTCC GTCTCCACAT TAACTCCAAA ACTTCCAACG CTACCCGATA CAAATTGGCT
TTTAGAGCCT ACGTTCGTGA GGCACATTTG TCGTTACAAC GAGGGGGCGA CATGCAGACT
TGGACAACGA TGCGCCTTTA TTCACATCAA AGCTTCTTTA GGCGAGAACC TTGTTAGCAC
TTTGGCACGT ATGCAGAAGA GCGGTGCCGA AGATGAAGGC TCTCTACAAT ACTTCCGGAA
AAATTTAAAG GTCATTTCGA GACAAGATTC ATCGAACTGC ATCTGGTATA CTGCTGGCTT
CTCGACGGTT GCTCGATTTC GTACCTCAAA CCAGCAGATA TTTTATGCGG AAGGAGGACC
TGGTGTCCTC AGTCAACAAG GGGTGACATG GTATCGTGAC CGAAAGAGTG CAGTGGAGTC
ACTTGCTCGA GTGTTCAAAA TTTTTAGGGA ATCGACCCGT ATAAAAAACC AAGAGAGTTA
GTTAAAGAGA CCACTGATAT CATCAGATCG AAAACGTGAC TCCGAGAGGC ATTGCAAAAT
GCGGTGACAA AAAATTACCG AGAATATCGA TCGATGCATG CGG
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| Protein sequence | MDADSTKRRA SLKRSRVAID FPHGRTSAKK QTVAKPDNAQ CSYVPVFDEP NQHLKALSSQ
NFCSMRKPSS PSSLSRTKNN ASCHHMENAH DRKWALSFEK LSEYKSRHGD TLVPKDYISG
GVPLGNWVRR QRYLQTAKLK GSKTPLTQSR IEKLNSLGFD WDTVSKRVFV RWEENFERLI
KYKETHGDTR VPSNYRIDDV NLGNWVRSQR AAYSMKTRGK SVVMNDERIY KLNSIGFQWD
LQSRLSGCCI GGFTELPSLA DQTIKELEVV FLQNLDREIL TAEEVHFMEK LEKAIIIEEE
KSLLQRIDEE VTKAEVCLLD ETPRVPKRTF TRVGRSSELM NGSHSPAIQN DSQLYTTMAV
DSATLYFPKH LKGNILISRE EFNSELLLAF KKECTELLDG FTTSMQVCQA QSDTWKLTVQ
GQPEALQKLS QILKAWIHNK INAFNYLLLV SEGREVEVQM KCTAQIEAKL VETAWNTNGV
KKQGLLIQAL SSKGQLGKAL GEQGTSCGAA VVSIEKQECS SIAQFKDLVK NTGVNNASYK
LQLMLHPESF QVVEHEGGMM NTAESHYGIV ENFKFVNQDT PSGSRRKAIC PSTASATSGS
YERKEYVFKF PSGEKLGFYC KNDRSGKSPV CRICSVCPNS ITAKDSRVLR GTIVVWASVG
NGDRCAVSKW QDLAILYTQA SQGPADLNIW FVNRHEGKFD HDGSRLLDSK DWTDTGIWRG
KEKAGWAGGD QTHCCENLDP RSGTDRDANS SLRPVALACR QEELESSEDE QWFLLDHMPS
IREHVRLHPA LKKAGSAKKG KTISFDRKLY QVRKFVRDSR TCEFYVQRKF QASPVASPSY
TIQVGSSISF ESKILQAIKK HSFKELIQVL QNGAFAANRS VAFLDTARRE LRLAVESMKL
ENSEYCGNPR NSLVRRRDLD LKHTVLKVYI SAAHTYGHAR GLRNWSRFEL LVKSIENLRL
SPSLLRGQGE SFISAKLSAI FPDSSSSEQL APLPHRPLSN LVEYGNEFSS SYFLNHNASI
AAGRCLVIEI QMNPSEASGS FRLGSMNVEV AELQANCPRD GSWWNVSKQI LTGPHLEDGV
VHINARRVAV DPEYIKAKRR DGCIRLKTTC DWACKFNDSL SPIERAGGVL DLHVPVFGGA
SLLHTAILLQ DSHLVRKLLD LGLDPGTKSQ IGSPMSLAFN LIENITHASK NNGMSGGETH
HNHAEPGDRA ENDRAAALAR ISKMLSSRNE QSNIRRDGAG LLQREGASLG LPSSTHSTIS
VSTLTPKLPT LPDTNWLLEP TFVRHICRYN EGATCRLGQR CAFIHIKASL GENLVSTLAR
MQKSGAEDEG SLQYFRKNLK VISRQDSSNC IWYTAGFSTV ARFRTSNQQI FYAEGGPGVL
SQQGVTWYRD RKSAVESLAR VFKIFRESTR IKNQES
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