Gene PHATR_43897 details

Gene Information

• Locus tag: PHATR_43897
• ID: 7204306
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: +
• Start bp: 358432
• End bp: 365030
• Gene Length: 6599 bp
• Protein Length: 2125 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002186048
• Protein GI: 219112929

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATAGAGAAGA GAAACATGAC TGTTAGGTTG TGTCTGCAGC TCTATTTGTG GCTACTTGGC 
TGCACTGCAA GGTCACTTTC ACAGAAGCTT CGTGGAAATC CATGGATGGG AGTGGTGGAA 
CCCTCCTTTC GAACAAATTC AGGTCGGCGT TTGGGATCCT TCGAGTGGGA GATCGATTTG 
CTTGATGGCT TTCCATTTCT CAACAACATC ACGGACACCA AACAAATCGA ATTTTCGTAT 
TGGTTCACCG GAAATGCTTC TCTACCTGGA AGATCTTTTG ACATTGTCCT CCTAGAAAAA 
GACTGCAGAA CCGCCAGTGT CGTATCGCCT CAAGGCAGAG GGCTATTTCT TGATAGCGAA 
GAAATTTATG ATCAAGGTAT AGACGTCATT GTCGGTGTTG ATCTTACATC AATTGCATCG 
TCTTCGTTTT ATAATAGAAC AAGTCAGCTA TCGGCAGCAA TTGAGTTCTG TCTTCGGGTT 
GATTATCAGA GTGCGGGCGA GTCGGTCAAC TTTCACGAGA CAACAGTATC GGTTTCTGTC 
GACTTAACCG CCGGTTTTCG ACTACAAAGT ATTTCTACTG AGCGGAACGA GGAAGCGGTG 
GTATCCGAAA GTGTCGCCTG CGAAGTCAAC GCGTATTTTT GTGACGACTC CTATACCGAC 
ACGGGTACGC CGAGGCTTGC GCAGGGTGAT GTTTTCCAGG CCTGTATTGC ATCGACTGGG 
CAATTTGTGA TCAAAGACAT TGTGTCGGCT CAGCTGGATC AAGGTCAAGA CAATCAGACA 
ACTGGTGTTC GAGACGACCT TGCTATCGAC TACGAAGTTG TCGATCCCCT TACAGTAATA 
TCCTGCAGCT TGGGACGTTG CAATATAAAA ACGCAAATGA GGACAAAATA CTTTTCAGAA 
AATAATCCAA TTTCGGTTCG ACTATCGGTA AGTCAAAGCA TCTGATTTCC GATGACCTCA 
AACGGAGTTC TCATAATTGT TTACCCAAAT TCTTCTTTCG TAGGGGTTGG CTCTGTGTGG 
CTTCGGATCA ACCCCAGCAG CATATTGTGC GTCATCTGTT AAGCCTGTAA TTGGAGAAAA 
TTCTGAGTTC TTAATTTACC CTGTTGCTCT CTCCTTGCAT GACTATGATA ATTCGGACGA 
GTATGAATCC GTCGTGATAA GCTGGTCGAC ACAGGGTACC AGTGCTGAAC CCTTTGTTGA 
GTTTGCAGTG GCACCGCCAG GTGTTTCAAT CACATTAGCC AACCGAGAGC TCACTTTGCG 
AGGAAATGCA CAAGACATCG AAGATGCTGT CGCAAATTTG AAGGTTCGCC CGGGACAAGA 
CAACGGAGAA GATATCGACA TCCGGGTGAA AGCAACAGCA ATGGACAGAA ATGGTCTAAT 
GGCCACCGCG GAATGCGGCT TTCGTATTCC TGTGGATCCT TTCGTTTTTG GGATTCTGAG 
GCTTGACTCG CCCTTTCCAT CGGATATCAG TATCCGTGCT TTCGAAGATA CAGCAATCGA 
GTTGAGCGGA ATATCGATTG AGTTCTCTGG GTATGACACA GACGGCTCCG AGGTGGCTTA 
CATAGAAATT GAAGCTTCTA GCATTCCAGA AGGGTCCGTG CTTCTTTCTA ATGGAATCGT 
GCAAACAACA ATTGTTGATG GATTTTTGCG GCTTCCAATG GAAGCAGGGT CGTCACTCAA 
AATAAAGCCA CCAAGGAATT ACAGCGGGGA AATTACGCTG TCTGTGCGTG GAGCTATTAC 
TGATGTAAGT CTGGCATGAG ATATCAATGA CGTCAATTAC TTGCCACTGA CTAGGCATGC 
ATACGCATTT CGCAGTACAC TGTTTCAAAT TCTGTGCTAG TAGCCACAAT TCCACAGAAA 
TTGTCGATTC AAGTGGAGCC TGTTGCTGAT GCAATAATGT GGACTACTGT TTATGCAATT 
GAGGATAATG GTGCGGTTCC GTTTGGCGCG ATTCTTGCTA ACAGACAGTC GGGGATCCGA 
CTTAACGACA TAGCGCAAGG GAAGGGAAAC AATCCTGAAC CAGAAACAAT TCTTCAGATA 
GTGATATCTG TTCCGCCCGA CTCAAACGAA GTCACCTATC TTGTGTCGGG GACGTTTGTA 
CCTCAGTCGG ATGGTATTGT CACAGGTGAA GGCACAGGAG TCGTATCTTT TGACCTACAA 
AGGCGGACCT TCACTATTCG CAGTTCGCTC CTGACGAACC GAGTCAATTT AGCAGCGGCT 
GATCAGGAAA CTCGAGAACA GGCCGATAAA GACATCCGCG CCACCTTAGC AGCCTTTTAT 
GTGGAGATTG GACCGACACA CACTGATATC GACGGAGACT TGTCGGTAAC TGTAACGACA 
CTTGATGTTC AAATGGGATT CTTCGATACA ACTGATGTAA CGTTTAAGCC TATCAAGTTG 
CAGGCTGTTG CTGACCAACC GTCGATTACA GTTCAGAGTG CGGCACAAAT TGTAAGCGAG 
GACGGTGACT TGGTGCCCCT TTATTTTACT GTGGGACGAA GCGCAGACGA AGATGGTTCC 
GAAAATCTTA AAGTGCTTAT CTCTGTGCCG TTGGATGAGC TTGGACCGAT CGGCTCTATC 
ACTGGTTCCT TGCCTGTAGG AGTTCTTGTC ATCAATGAGG GCCCTGGTCT GTATCTTATT 
TCTTCGTCAG CGACAACTCC TATCGGACAG GAGACTTCTC TAAATCAACT TTTCGATGGA 
CAGATCAAAT TTCATCCCAG AAACAATTTC TCCGGTCAAT ACCTCGGGTC AAACGGGATA 
CGTGTTGACG TCTTCATGGA AGAGAGAGCT ACAAATGATC AGCTTGCCCC TGTAGAATAT 
GGCTTGGATG GAGATTCGAA ATTAGCCAAA GCTACCGGAT TTATTGATAT CTTCGTCTTG 
CCAGACGCAG ATAAGGCAAC AGTCCTTGTG AAAGGGAATG CCGCTGGCAT GGAAGACAAA 
CCAATACCAG TCCCATTGAG TGTGACTCTG GGGGATCTTG ACGGATCCGA AAGCTACTCA 
ATGGAAATTG TTGACAATCT CCCTGCTGGT GCCAAACTTC TCGGTTCAAC CAGTCGTGAA 
CTTCTTTCAG AAGATGGAGT TTTTTTCTTG TTCCCAATAG ATGTAGAATC TCTCATACTG 
TTACCACCAC TTCACTGGTC AAGTGCAAAG CAAGGTGACA TTGTTCTCCT TACAAATACA 
ACAACGGTTG ATATAAGCCC TCAATCATCC TCTAGTGCGT CGGTATACCT TTCCATTCCA 
ATCAAGATTG TGGGCGTAGC TGACAAGCCA AATACTCGAC CAGTTGTTGT ACATTGTTTG 
GAAGATGGAA CTTACAACCT CGGATCATCA ATCGGGGATC TAAGTGGGGT CTTGGTTGAT 
GTAAGCATTC TAATCCGTAT AATCGTTGTC AAGAAAGGAT CCCCTAACCT GCTTTGCTCG 
TTCTCAATAC AGACCGATGG ATCCGAAGTA CTTTCTCTTG TTTTATCCGG TCTACCACTT 
GGAGTCGTGC CTCAAAGCGA GGAGAGTAAT ATACAATATT TAGGGAAGGG ACGATGGCAA 
GTGCCTGAAA CAGCGATTCC TTCTCTCACG CTCCCTGCGT TGCCGAACTT CTCCGGAGAC 
AATCCCTACA CGGGAATTAC TATCAATGCA GTAAGCCAGG AGTTGGACAG GGATCAAGCG 
GTCTCTGATT CTTGGCCAGT GACAATAAAG GTACGCCCTG TTGTTGATGG GTTTGCTTCT 
TGGTCGATGT CTTTCACCAC GACGGAGGGG ATGAACGAGG CAAACAATGG CGGTATAGAT 
TTCAAAAGTG TCAAAAACTT TGTTCTTGGG GATGAGGATA ATTCCGAAGC TGTAATTTCG 
TTTACTTTTG ACTTTTCCAA CTTAATGGTC AATGCCGGGA TCAGAACTCG CCTGAATCAG 
CTGGAGGGCC AAAGTGCTGG ACTCGAGGAG TTAGTGTCAA AAAGAATGGA CGGGGAATTT 
ACCTTCGACC AAGAAAGTGG CACGGTATTG GTACTCTCCG AAAATATCGA AAATATCAAG 
CTCCACTCAG AACTCTTTCT TGATTCAAAC CAAAATTTTG AAATCCCTGT CAATGCGTTA 
GTTCGAGATT CTGCTGTATC AGACGGAAGT AGCGTTAGGG AAGACAAGAT CAAGTCAGGC 
GTGTTATTTG TCATTATAAG TGGAACCGCT GATATCCCTA CGGTGTTTGC AGAGCCGACC 
ATCTCCGGAA GTGTTGGTGA GTCCGGAATT CCAGTCCGGC TAGGTGGGGA AACGACAGAT 
CGAGACGTCT CACTTGGCAG AACTCAGTCA GAAGATGTTT ACTATCTGGT CAGCACCAGC 
AGCAGCTCAA TTTCCAACCT GTTCACATTT TCTGGCGCTG GATTAAACAA TGGAGACGGT 
CACTGGACTT TAGAGAAAAG CGACTTGGCG GGATTACAGG TTTACTTTAG TCCTTCGATT 
GGCATGAGAA ATCAAAGCGA AGCTAGTTTT GATTTAACAG CAGTCGCTGT CGAGGATGAT 
GGAGACTGGG CAGTCAACAC TACGACCTTC AAAGTTATTC TTCAACCCAA CGAAGCGGGA 
GATACGATGA CGATCCCCCC TTTGCCACCT CTTCTCGCCA TCGGCCTTAA TGCAGGGTTA 
GAAGATACAA AAATATCTCT GGGTAGCATC AGTGCCGTCG TCAATCCTGA CGATCCTACC 
AATACAACTA TCAGTGTTGC AATCTGGAGC ATCCCTCCCA ATGCTAAAGT GTTCGGTGCT 
CGGCTTAACC CCACCACTGG AAAATGGATA TGCTCTGCTG CCAGTATCAA TTCAGGTGCT 
GTTCAGATAC TTCCGGGCCC AGACTATTCT GGTTCATTGA TGTTGACTAT TCAAGCCATC 
GCAACCAACC ATTACGCCTT GTCAGCTCAT AGTCCTGAAC AAAAGCTTGA ATTCATTGTA 
GACCCTGTGG CTGATGGTGC AGCTATTTCC ATCTCTCCTA GCTCAGGCTT GGAAGATGAA 
ATGGTCTCAC TACGCGTTTC ATTGACGGAG CTGGACGTTG ATGGAAGTGA GCGAATTGGT 
CATTTTGCAT ACATAAAGAT GACGAACGGG GCCACTCTTA TAGGCAACTA CACTGTCGTC 
ACAGAGTATG ACAATGACGC CTTCATTGGG ACATTTTCCA ACGCTTACTC ACTGCGCGTA 
CCATCAGAGG AGATTTCAGA ATTGTCACTG AAGCCGGCCG CGAACTGGCA TGGGACAATC 
ACTCTAGAAA TTTCAGTCCC GGTTGTAGAG CGTTTCGACG ATGAAGACGG TGATCACGTC 
AAGGTCGCCC GAAAGTAAGC AAAGTGGCCG AACCAATTCC AATACGCGCA ACTGCTACTC 
AATTTCTCAC GCAATTGACC AATTTTGCTT TTAGGACTCA TTCAATTGAG ATCAGTGCGT 
TAGCCGACAT GCCCGACATT TCCGTTCCGT CCGTCACCAC TATAGGTGAC GAAGACACAG 
AAATTGCTAT TGCATTTCTC GCGGCCAGTC TAACCGACAC AATAATCGCG AATGGTCGTG 
AAATTCTCTC TGTTGTGATC AGTAATGTTC CAGAAAGTTC AACGTTCAAC TCAGGATACA 
ACAACGGGGA TGGGAGTTGG GCAATTCCGA CCGCAGCCCT AGACGGACTT TCTCTCTTAC 
CCCCGGAACA TTTCGCCGGA ACTGTCAAAC TGACACTTAC AGCGTATGCA TTGGAACTGG 
AGAATGGCAG CGAAAACAGT CAGAGCGGCG ACTTTGATAT CAACGTCCGT CCTGTGGCCG 
ACCCTTTCCT CATGGTCGCG ACAAGTATCA GTTTGCAAGC CAGTTCGGGA ACTGTTGATA 
TAGCGTTGAA TTTGCGTCTG CAAGATACGC GCGGCGACAG CCCAGGAGAA ATTCCACCCG 
AGATTGTCCA ATTGGAGTTT CAAAATCTCC CTCGCGGTAT ATATCTTCGG GCCAGTCAGG 
GTGGTGGTGT TGTCACCACA CCTGCCGGTA CATTTGTGTT CGCCGGCTCG CAAGCCCAAG 
CCAACGCGTT GCGTCTTTTG GCCCGTAACG CTACAGAAGG CACCTACCAG ATTGCCATCA 
GTGGTGTCAC CGTTGATGGT GACAGTATCC TGTCACCAGC GGTGCGGGAC TCTTTTAGGC 
TGACCATCTC CCCGTCAAAC CAAACGTTGC CCGGCGTGGA ACTGATAGGC ACAAACGGGG 
CGGACAACCT GACTGGATCG ATTGGACATG ATATTTTGAT GGGCTTGGAA GGTGCTGACC 
TCATGCGTGG AGGCGACGGT ATGGATTGGC TGGCCGGTGG ACCTGGCGCT GATGTGTTGA 
CGGGAGGCAA CGGCGCTGAT GTCTTTTCGT GGAGCTCACT CGATTTGGAC GGGTCAGTGG 
ATCGCATAAC TGATTTTGCT GTTGGGCAAG ACCAGCTCGA CCTTGTCAGC GCTCTGAACG 
GATACAATCA GCAATTATCG GATATTTCGA GCTTTCTCAG TGTCACTACT AGCAACAATG 
ATGCAGTGAT TTGGATCGAC ATTCAGGGAG GCGGGAATTT TTCCCGATTT GTGTTGCTGG 
AGAACTTGGC TGGAGTGAGT CTCAATGAAC TGGTCTCGAA TGGAAGCATC TTGGCTTAA 

 

Protein sequence

MTVRLCLQLY LWLLGCTARS LSQKLRGNPW MGVVEPSFRT NSGRRLGSFE WEIDLLDGFP 
FLNNITDTKQ IEFSYWFTGN ASLPGRSFDI VLLEKDCRTA SVVSPQGRGL FLDSEEIYDQ 
GIDVIVGVDL TSIASSSFYN RTSQLSAAIE FCLRVDYQSA GESVNFHETT VSVSVDLTAG 
FRLQSISTER NEEAVVSESV ACEVNAYFCD DSYTDTGTPR LAQGDVFQAC IASTGQFVIK 
DIVSAQLDQG QDNQTTGVRD DLAIDYEVVD PLTVISCSLG RCNIKTQMRT KYFSENNPIS 
VRLSGLALCG FGSTPAAYCA SSVKPVIGEN SEFLIYPVAL SLHDYDNSDE YESVVISWST 
QGTSAEPFVE FAVAPPGVSI TLANRELTLR GNAQDIEDAV ANLKVRPGQD NGEDIDIRVK 
ATAMDRNGLM ATAECGFRIP VDPFVFGILR LDSPFPSDIS IRAFEDTAIE LSGISIEFSG 
YDTDGSEVAY IEIEASSIPE GSVLLSNGIV QTTIVDGFLR LPMEAGSSLK IKPPRNYSGE 
ITLSVRGAIT DACIRISQYT VSNSVLVATI PQKLSIQVEP VADAIMWTTV YAIEDNGAVP 
FGAILANRQS GIRLNDIAQG KGNNPEPETI LQIVISVPPD SNEVTYLVSG TFVPQSDGIV 
TGEGTGVVSF DLQRRTFTIR SSLLTNRVNL AAADQETREQ ADKDIRATLA AFYVEIGPTH 
TDIDGDLSVT VTTLDVQMGF FDTTDVTFKP IKLQAVADQP SITVQSAAQI VSEDGDLVPL 
YFTVGRSADE DGSENLKVLI SVPLDELGPI GSITGSLPVG VLVINEGPGL YLISSSATTP 
IGQETSLNQL FDGQIKFHPR NNFSGQYLGS NGIRVDVFME ERATNDQLAP VEYGLDGDSK 
LAKATGFIDI FVLPDADKAT VLVKGNAAGM EDKPIPVPLS VTLGDLDGSE SYSMEIVDNL 
PAGAKLLGST SRELLSEDGV FFLFPIDVES LILLPPLHWS SAKQGDIVLL TNTTTVDISP 
QSSSSASVYL SIPIKIVGVA DKPNTRPVVV HCLEDGTYNL GSSIGDLSGV LVDVSILIRI 
IVVKKGSPNL LCSFSIQTDG SEVLSLVLSG LPLGVVPQSE ESNIQYLGKG RWQVPETAIP 
SLTLPALPNF SGDNPYTGIT INAVSQELDR DQAVSDSWPV TIKVRPVVDG FASWSMSFTT 
TEGMNEANNG GIDFKSVKNF VLGDEDNSEA VISFTFDFSN LMVNAGIRTR LNQLEGQSAG 
LEELVSKRMD GEFTFDQESG TVLVLSENIE NIKLHSELFL DSNQNFEIPV NALVRDSAVS 
DGSSVREDKI KSGVLFVIIS GTADIPTVFA EPTISGSVGE SGIPVRLGGE TTDRDVSLGR 
TQSEDVYYLV STSSSSISNL FTFSGAGLNN GDGHWTLEKS DLAGLQVYFS PSIGMRNQSE 
ASFDLTAVAV EDDGDWAVNT TTFKVILQPN EAGDTMTIPP LPPLLAIGLN AGLEDTKISL 
GSISAVVNPD DPTNTTISVA IWSIPPNAKV FGARLNPTTG KWICSAASIN SGAVQILPGP 
DYSGSLMLTI QAIATNHYAL SAHSPEQKLE FIVDPVADGA AISISPSSGL EDEMVSLRVS 
LTELDVDGSE RIGHFAYIKM TNGATLIGNY TVVTEYDNDA FIGTFSNAYS LRVPSEEISE 
LSLKPAANWH GTITLEISVP VVERFDDEDG DHVKVARKTH SIEISALADM PDISVPSVTT 
IGDEDTEIAI AFLAASLTDT IIANGREILS VVISNVPESS TFNSGYNNGD GSWAIPTAAL 
DGLSLLPPEH FAGTVKLTLT AYALELENGS ENSQSGDFDI NVRPVADPFL MVATSISLQA 
SSGTVDIALN LRLQDTRGDS PGEIPPEIVQ LEFQNLPRGI YLRASQGGGV VTTPAGTFVF 
AGSQAQANAL RLLARNATEG TYQIAISGVT VDGDSILSPA VRDSFRLTIS PSNQTLPGVE 
LIGTNGADNL TGSIGHDILM GLEGADLMRG GDGMDWLAGG PGADVLTGGN GADVFSWSSL 
DLDGSVDRIT DFAVGQDQLD LVSALNGYNQ QLSDISSFLS VTTSNNDAVI WIDIQGGGNF 
SRFVLLENLA GVSLNELVSN GSILA