Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_43867 |
Symbol | |
ID | 7204285 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 266552 |
End bp | 268409 |
Gene Length | 1858 bp |
Protein Length | 485 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186310 |
Protein GI | 219113453 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0425641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCTCATAGTG GGCGAGCATA ACTCCAGAAT CCTTGAAACA ACTTCCACTA TCACTGTAAC GAACTATGAG CACATCACAA CAACAAACGA AAGACAAGAA ACGCAAGGAG CCTTGCGACG AGGCCACGGT CGCCGCATTG CTTGAACTTG GAAATAGTCG CAACTGCGCG GAAGATAGTC AGGAGCAGCT GCAGGATTCA GATGACAATG AGAGACATAC TGCAATTTCA GGCGAGGAAC GGAGTTTGGA AAAGACTGGT TCGGACCACA CATCGTCCAG TAAGCGCCAA AGCGTCACGC AAAAGGAACG CTGGAACTCC ATGTTCAATG CTCTTCTGAA ATATCAGGAA GAGTACGGAA GTACACTGGT TCCTTTCAAC TACGACATTT CCGGAACAAA ACTCGGACGT TGGGTGAAGT GAGTAATTTG TTTTCGGAGA GGATCATCGA TGTTCTTTCT TGTCTTGACT GAAATTCCAT TCTCAAAATT GCTGCTGCGA CCTCACTCAC CTTAGCAAAC AACGAAGCCA GTACAATAAC CTTTGTCGAG GACGCTCGAG CCAAATGACT GAAGAGCGTG TAGAACGCCT AGAAAGCATG GGCTTTGAAT GGTCTGCGAA CCCATTGCCG GCCCTCGAAC AGTGGGACAC CAAGTGGGAA TTGTTGCGGG ATTTTCATCG CCGATTTGGA CACACACGTG TGCCTCACAA ATATGAAGTC GACGGAGTCA AGCTTGGACA GTGGGTTTCC TACCAACGCA ACCAGAAGTC GCGTAAGGAG CGAGATCTAC CCTGTGAAAT CACCATGGAC CGCATTGAAA AGTTTGATTC ACTAGGATTT GAATGGAAGG TTCTGGACAC GCCTACACCT TCATCCTCTC GCTCTTCCTT GGCTGCAGGT GACCATACCA CGACTCGTCG TCCAACCGCC GACAAGACCA CTTCTTTGAG TAGCAAGCGA CCCAGCTGGG AAGAACACTA CAAGCTTTTG GCGCGCTTCC GGAAAGTTCA CGGGAGTACG CGTGTGCCTT TGAATTTTGA TATTGATGGC GTTGCTCTTG GTGAATGGGT GTGGTACGTT GAAATGGAAA AGAGCTCTGT TTATATTGAA TTATCCCTAA TTGGTCCTTT TTGAAACGCA GTGCTCAGCG TCATCAACTT GCCCGCATGA AGAAAGGCCT TCCGAACGAA ATAAAGGGTG TCCAGATCGA CAAGCTAAAT GATCTCGGCT TTGAATGGAG CTGCCCTTAT AACAAGCGCT TCAAGATAGC TGGCCACCCG ATGCCTGATG AATCCACCGA TTCCAAAGTT TTGTCGGATT ATCGACGGCC CGGACCATTA GGTCCACTAT TTCCACCAGT TAACCCTATG GCTGCGTTGC GGGGGATACC ACCACCACCT GCCGCAATAG ATCCCTTAAT AATCGCCGAG TTGGACCAGC GTCGCTTGAT GTTGGAGCGC GCACGAATGA TGGAAGCTGC AGCCCTTGGC ATAGGACCAG CAGAATTTGG AGAGTGGTCA GCCGTTGCCG CCATGGCCCG TGACCGCTCG GTGCGAGACA TGATTGTATT GGACCGCATG GCAATGAGAG AGCAGCAAAT GCGAATGGAA TCAAACGCCA GCACAGGTTC ACTGCATGAT TCAATGCTGG ATGGAGCCAT GATGTACCAG GCCGGACTGT ATCGATAAAT GGTGATGAAA CTGTGCCCTC ACGTGTATAT ATGAAGGGTA TGAATGCTCC ACAATTTACG ATATATGTGT TTGCTATCAG CGGAGTAGTA GCTGTAATTT TTTTGTTCTG GCATCGAGAA TTACGGAAAA GTCTCAAGGC TTAGGTCTAT GAGCATAGTT GACGGAAG
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Protein sequence | MSTSQQQTKD KKRKEPCDEA TVAALLELGN SRNCAEDSQE QLQDSDDNER HTAISGEERS LEKTGSDHTS SSKRQSVTQK ERWNSMFNAL LKYQEEYGST LVPFNYDISG TKLGRWVNKQ RSQYNNLCRG RSSQMTEERV ERLESMGFEW SANPLPALEQ WDTKWELLRD FHRRFGHTRV PHKYEVDGVK LGQWVSYQRN QKSRKERDLP CEITMDRIEK FDSLGFEWKV LDTPTPSSSR SSLAAGDHTT TRRPTADKTT SLSSKRPSWE EHYKLLARFR KVHGSTRVPL NFDIDGVALG EWVCAQRHQL ARMKKGLPNE IKGVQIDKLN DLGFEWSCPY NKRFKIAGHP MPDESTDSKV LSDYRRPGPL GPLFPPVNPM AALRGIPPPP AAIDPLIIAE LDQRRLMLER ARMMEAAALG IGPAEFGEWS AVAAMARDRS VRDMIVLDRM AMREQQMRME SNASTGSLHD SMLDGAMMYQ AGLYR
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