Gene PHATR_43867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_43867 
Symbol 
ID7204285 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp266552 
End bp268409 
Gene Length1858 bp 
Protein Length485 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186310 
Protein GI219113453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0425641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCTCATAGTG GGCGAGCATA ACTCCAGAAT CCTTGAAACA ACTTCCACTA TCACTGTAAC 
GAACTATGAG CACATCACAA CAACAAACGA AAGACAAGAA ACGCAAGGAG CCTTGCGACG
AGGCCACGGT CGCCGCATTG CTTGAACTTG GAAATAGTCG CAACTGCGCG GAAGATAGTC
AGGAGCAGCT GCAGGATTCA GATGACAATG AGAGACATAC TGCAATTTCA GGCGAGGAAC
GGAGTTTGGA AAAGACTGGT TCGGACCACA CATCGTCCAG TAAGCGCCAA AGCGTCACGC
AAAAGGAACG CTGGAACTCC ATGTTCAATG CTCTTCTGAA ATATCAGGAA GAGTACGGAA
GTACACTGGT TCCTTTCAAC TACGACATTT CCGGAACAAA ACTCGGACGT TGGGTGAAGT
GAGTAATTTG TTTTCGGAGA GGATCATCGA TGTTCTTTCT TGTCTTGACT GAAATTCCAT
TCTCAAAATT GCTGCTGCGA CCTCACTCAC CTTAGCAAAC AACGAAGCCA GTACAATAAC
CTTTGTCGAG GACGCTCGAG CCAAATGACT GAAGAGCGTG TAGAACGCCT AGAAAGCATG
GGCTTTGAAT GGTCTGCGAA CCCATTGCCG GCCCTCGAAC AGTGGGACAC CAAGTGGGAA
TTGTTGCGGG ATTTTCATCG CCGATTTGGA CACACACGTG TGCCTCACAA ATATGAAGTC
GACGGAGTCA AGCTTGGACA GTGGGTTTCC TACCAACGCA ACCAGAAGTC GCGTAAGGAG
CGAGATCTAC CCTGTGAAAT CACCATGGAC CGCATTGAAA AGTTTGATTC ACTAGGATTT
GAATGGAAGG TTCTGGACAC GCCTACACCT TCATCCTCTC GCTCTTCCTT GGCTGCAGGT
GACCATACCA CGACTCGTCG TCCAACCGCC GACAAGACCA CTTCTTTGAG TAGCAAGCGA
CCCAGCTGGG AAGAACACTA CAAGCTTTTG GCGCGCTTCC GGAAAGTTCA CGGGAGTACG
CGTGTGCCTT TGAATTTTGA TATTGATGGC GTTGCTCTTG GTGAATGGGT GTGGTACGTT
GAAATGGAAA AGAGCTCTGT TTATATTGAA TTATCCCTAA TTGGTCCTTT TTGAAACGCA
GTGCTCAGCG TCATCAACTT GCCCGCATGA AGAAAGGCCT TCCGAACGAA ATAAAGGGTG
TCCAGATCGA CAAGCTAAAT GATCTCGGCT TTGAATGGAG CTGCCCTTAT AACAAGCGCT
TCAAGATAGC TGGCCACCCG ATGCCTGATG AATCCACCGA TTCCAAAGTT TTGTCGGATT
ATCGACGGCC CGGACCATTA GGTCCACTAT TTCCACCAGT TAACCCTATG GCTGCGTTGC
GGGGGATACC ACCACCACCT GCCGCAATAG ATCCCTTAAT AATCGCCGAG TTGGACCAGC
GTCGCTTGAT GTTGGAGCGC GCACGAATGA TGGAAGCTGC AGCCCTTGGC ATAGGACCAG
CAGAATTTGG AGAGTGGTCA GCCGTTGCCG CCATGGCCCG TGACCGCTCG GTGCGAGACA
TGATTGTATT GGACCGCATG GCAATGAGAG AGCAGCAAAT GCGAATGGAA TCAAACGCCA
GCACAGGTTC ACTGCATGAT TCAATGCTGG ATGGAGCCAT GATGTACCAG GCCGGACTGT
ATCGATAAAT GGTGATGAAA CTGTGCCCTC ACGTGTATAT ATGAAGGGTA TGAATGCTCC
ACAATTTACG ATATATGTGT TTGCTATCAG CGGAGTAGTA GCTGTAATTT TTTTGTTCTG
GCATCGAGAA TTACGGAAAA GTCTCAAGGC TTAGGTCTAT GAGCATAGTT GACGGAAG
 
Protein sequence
MSTSQQQTKD KKRKEPCDEA TVAALLELGN SRNCAEDSQE QLQDSDDNER HTAISGEERS 
LEKTGSDHTS SSKRQSVTQK ERWNSMFNAL LKYQEEYGST LVPFNYDISG TKLGRWVNKQ
RSQYNNLCRG RSSQMTEERV ERLESMGFEW SANPLPALEQ WDTKWELLRD FHRRFGHTRV
PHKYEVDGVK LGQWVSYQRN QKSRKERDLP CEITMDRIEK FDSLGFEWKV LDTPTPSSSR
SSLAAGDHTT TRRPTADKTT SLSSKRPSWE EHYKLLARFR KVHGSTRVPL NFDIDGVALG
EWVCAQRHQL ARMKKGLPNE IKGVQIDKLN DLGFEWSCPY NKRFKIAGHP MPDESTDSKV
LSDYRRPGPL GPLFPPVNPM AALRGIPPPP AAIDPLIIAE LDQRRLMLER ARMMEAAALG
IGPAEFGEWS AVAAMARDRS VRDMIVLDRM AMREQQMRME SNASTGSLHD SMLDGAMMYQ
AGLYR