Gene PHATR_43862 details

Gene Information

• Locus tag: PHATR_43862
• ID: 7204326
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: +
• Start bp: 249283
• End bp: 251276
• Gene Length: 1994 bp
• Protein Length: 632 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002186026
• Protein GI: 219112885

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.01884
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCAAAAAGCA CCATGGAGAT TGCTGATAGA TGGAAGAAGG AAACCTTCGA CTGGTTCTCG 
AGAAGTATTG AAACGCGAGT CGCCGACGGC CTTGCCGTTG ATATTCAGCG CGAGCCCAGA 
TTAGAAAACA ACACACAAGA ACTTACGTCG TCGTCCAACG TTACCCCTTC CCCAAGGAGA 
GCTACCCACC AATTGGAAGT TGCGGTAGGA TCAGTCGCGG CACATATGCA TCCGCATTCG 
AATTTGTACG ATTTGACTGT CGACATGAAT TGGCGCAAGG TACTGAGGGC CTGTGAGATT 
CGTCCGGTAG ATGCCTCGTA CCAGGACGCT GATCTGGGTG AAACACCATT GTACGTGGCT 
TGTCAACAAC GTCCCCCCGT ACGTGTCGTT CGAGCGTTGC TGAGAGCCTT CCCACAAGGA 
GCATACGTAC CCTCATATAA CGGTGATTTG CCTATACACA TTGCCTGTCG TTGGAATGCC 
TCTATCGAGA TATTACGAGA GTTGGTGCAG TGGGCTCCTG ATACGGCTTC GCAAGCCTCC 
AAGTGGGGTG CCACGGCACT GGTGGCGCTC TGGGACGGAC GGGACGTTAT CGATAGCAAC 
GACGCGCCGG AAAATTATAA CACAGTGTTT TGGCAAAAAG CACAAGTCAT TCTGGAAGCC 
ATTGCGAAGT CACGACGGGT GCAGCACGTT ACCAGGCAGG ACAATGGTAC ATCCCATGGG 
GGCTCTCCGA AAGTCAACGA ACGCTCGCAA AAAACGGCAG AAGCAGAACC TTTCGTATTG 
CACGCTGCCG TATCACTCGG ATCTCTCGGT TGTCCGTATC CAATTTTGGA ATACGCCATT 
GCGAAATATT CGCATCAGAA ATTTCAGCGG GATGAAAGCG GTAAGCTCCC ATTGCATATA 
GCTGTGGGAC CGACCACGTG GTCCAAACTG TCCCGTCGTC GGTACAAACC ACGCGAGCAA 
CAAGTTATAA GCAAATTGTT AGAATTGGGT TCCGATACGG CGCTCCAAAT TGACCCCAAT 
GAACCGAGCG GTCGGTATCC ACTACATACG GCTTTAACCT ATCGACATCA GTGGTCCGGC 
GGCGTCAAGG ATCTGTTCAA ACACAGTCCT GAACTAATTT TGTGCCGCGA TCCCATTCTT 
GGTGTTTATC CATTTCAACT AGCGGCAATT CCGGTCGGAT CGTCAATCTC TACAACATTG 
TGTACTCCTG ATCTCGCCGC AATCTACCAC TTGCTCCGAT CTCACCCTGC TGCTCTCAAT 
GCACCCATTG CGCGTCTTGC TTCGAGCGAG CATATCGATA CTCACCACGA CGACGGAACA 
TGTTTGCGCC TATTGCTGAC ACCACCTTTG GAGCCAACAG GGCTTTCACC AATTGTGACA 
CCCCGGGAGC GAAGACAACG ATCGTCTCGT CCACAACGAG TTTCTGACGT TTCTAAGAAT 
ACTCACTCCG CGGGGGGAGA AGATGATAGC TGCCGCATCA TGGAGAATAA AATTCTCAAG 
CCGGCTGTGC CGGTAACGAC CCGGATCCGA CAATTGGAAG AACGACGAAT AAAAGCAGCG 
ACGAGATCCT GCTTACATCC TTACACTAAA GAGCCCCGGG AGACGAGAGG TTGCGAGCCC 
TTGTCCACGT CTTCAGCTGT ACCCAGCGAA ACAGCCACTA CCAGTCCTAC AACGGTAACT 
TTGTCCATCA TATCCAAACT GCCCAAGCTT ACATTTGCAC CGTTAATAGC ATCTCGAATG 
ATTTGCGAAT ACTTAGTGCG CCACGCCCGT GAAAGCAAAG AGGCAGTCGC AGCATCTTGT 
CCGACCGCTT GCCAAAAGGA ATGCTTTTGC GTGTCGGCCA TAGTAATTGC TGGAGGTTTC 
TTGGCTTGGG CGTTTGTGGA TGAATCGAAG TTACAGTCCA ACGAGGAATA GATTCCTTTA 
AAAGGCGGGG AGGAGATAGA TGAACACATT GTCTTACTCT CCAAGCAAGT GTAAACTTGT 
CTATTTCTAT TTGT 

 

Protein sequence

MEIADRWKKE TFDWFSRSIE TRVADGLAVD IQREPRLENN TQELTSSSNV TPSPRRATHQ 
LEVAVGSVAA HMHPHSNLYD LTVDMNWRKV LRACEIRPVD ASYQDADLGE TPLYVACQQR 
PPVRVVRALL RAFPQGAYVP SYNGDLPIHI ACRWNASIEI LRELVQWAPD TASQASKWGA 
TALVALWDGR DVIDSNDAPE NYNTVFWQKA QVILEAIAKS RRVQHVTRQD NGTSHGGSPK 
VNERSQKTAE AEPFVLHAAV SLGSLGCPYP ILEYAIAKYS HQKFQRDESG KLPLHIAVGP 
TTWSKLSRRR YKPREQQVIS KLLELGSDTA LQIDPNEPSG RYPLHTALTY RHQWSGGVKD 
LFKHSPELIL CRDPILGVYP FQLAAIPVGS SISTTLCTPD LAAIYHLLRS HPAALNAPIA 
RLASSEHIDT HHDDGTCLRL LLTPPLEPTG LSPIVTPRER RQRSSRPQRV SDVSKNTHSA 
GGEDDSCRIM ENKILKPAVP VTTRIRQLEE RRIKAATRSC LHPYTKEPRE TRGCEPLSTS 
SAVPSETATT SPTTVTLSII SKLPKLTFAP LIASRMICEY LVRHARESKE AVAASCPTAC 
QKECFCVSAI VIAGGFLAWA FVDESKLQSN EE