| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_43860 |
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| Symbol | Lhcr9 |
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| ID | 7204282 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | + |
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| Start bp | 243000 |
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| End bp | 244106 |
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| Gene Length | 1107 bp |
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| Protein Length | 279 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | fucoxanthin chlorophyll a/c protein, lhcr type |
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| Protein accession | XP_002186024 |
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| Protein GI | 219112881 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.195937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTGCGTCAT TGCGGCTGCG CCGAGTCAGC AAAAGAAGGA GAAAGTCGAG GAAAGGCAAT
GAGCATCTTC GTCCAACGTC TTCTCTCTCT TTTTCGATAG TTTGCGGGTG CTCATCGCAA
ACGTGTATGT ATAGTTTCTT TTTACATGCA AAATTGACCC CTCAAAGAAA TTAAACATAT
AAAAATGAAG ACATCCTTTT TCACGATCCT TACAGCTGTG ACGACTGTAG CAGCATTCGC
TCCTTTAAGT CCAAAGCATC AACGCTTAGC AAGGATTTTC TCTCAAGTCG ATGAGGAGAC
TAAATTGGAA AAGTTTTCCA AAGAAGCGCT AGAAGAAGGA GACGAACGCA CGGGCCCAAT
AGAGAACGCA TTGGAAAGGG AGGTCGTGAC GAGTGATGCA GTCAATTCTC CACCCGGGAT
GTCAACCGCT ATCCCATTCC TCAAGCGCCC AGAATTTTTG GACGGTTCGA TGCCAGGCGA
CGTTGGCTTT GACCCCTTTG GCTTTGTAGA TTCTGAGGCC AGCCTTGTGA GCTTTCGAGA
AGCAGAAATT AAGCACGCCC GGCTTGCCAT GCTTGTACGT ATAGACACTA CAAACCAGAG
ACCGAGTTGT CTGTATGCAA TGTCCGACGT GCCTCACTCG CTATATCCGC TTTTTAGGCT
GCTGCTGGTT GGCCGTTGTC TGAGCTCTTT GATCGCCAAT TTGCATCCTG GTTGGATTTG
GATCCGGCCT TGGATGCAAC CGATCGCGTA CCAAGTATTT TGAACGGTGG ACTAGGTAAG
ATTTCTCCTG TCTACTGGGG CGCCTGTCTA GGTGCTGCTG CTGCGATCGA TTTGTACGGA
CTCCGAAAAA AGCGTAGCGA TCCGGATTAT TTTCCGGGAA AACTTGGTTT TGACCCGTTG
GGATTGTATC CGTCTACCAC TACTGGAAAA CGGCGCATGG AGCTAGCGGA AATCAAAAAC
GGACGGCTCG CTATGATCGC CATCACTGGC TTTGCTTTTC AAGAATTCGT GCAACAGTAC
GCCGTCGTGG ACCAAACTCC TCTTTTGTTT AAACCCGTTT CGGATGTTGT TGAAACGTAC
GGAAGTATTG GCGGTTATGG AATGTAA
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| Protein sequence | MKTSFFTILT AVTTVAAFAP LSPKHQRLAR IFSQVDEETK LEKFSKEALE EGDERTGPIE
NALEREVVTS DAVNSPPGMS TAIPFLKRPE FLDGSMPGDV GFDPFGFVDS EASLVSFREA
EIKHARLAML AAAGWPLSEL FDRQFASWLD LDPALDATDR VPSILNGGLG KISPVYWGAC
LGAAAAIDLY GLRKKRSDPD YFPGKLGFDP LGLYPSTTTG KRRMELAEIK NGRLAMIAIT
GFAFQEFVQQ YAVVDQTPLL FKPVSDVVET YGSIGGYGM
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