Gene PHATR_43840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_43840 
Symbol 
ID7203967 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp200583 
End bp201528 
Gene Length946 bp 
Protein Length110 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186297 
Protein GI219113427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.881392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCTCGATCAA GTACCTTTGC TTTATCCTGC TGAGAAACTG TAGTAAAGGG GCAACGTAGA 
TTTCAACTTG TTAATCCACA AAATCAACCA TGGTGTCCAA GAAAGCGGTA CGTCAATGAC
TCCGGAGGTC GGCACAGTTA ATTTGCCCGC CCGAGATGGT AGTCTTTGAT GAACCCAATC
GATGGTCGGT GTAGACGGCT GGGGTGCCTT GTATGATTCA AGTGAACAAA AGCAGCTTTA
AGGCTCATTG ATGTAGATTC TCCTGCATCA AGGACGTTAT TTGCTGGCGA CGATAGGACG
TGAAGGCTGG TAATCCCGGT CCGTTGCGTT CGAGTCTTTC CTTTATGAAT CATATATGTT
GGTATCTCCC AGTCGCCTTC CCGATTGTAT TTCAATAACT ATATTGGCCG TGAACTTCAG
TCACTACCAT TCCGGGCGGG AGGAGATGAA ATCATGTTCT CCCAGGTTCA GCACTAACAA
AAAACTTTTT TCCCTCCCTG TCTTTCCGCA ACGAGCGTAG AAGAAGCAAC AAGACTCAAT
GAACAGTCGT CTCAAGCTGG TCATGAAGTC CGGTAAGGCC ATGCTCGGGT ACAAGGCCTC
CGTCAAGGCT CTGCGCAAGG GGAAGGCTAA AATGGTCCTT GTCGCCTCGA ACTGTCCGCA
TTTGCGTAAA TCGGAAGTCG AGTATTTGGC CATGTTGGCC AAGACACAGG TACATCACTA
CGCCGGCGAC AACACGGCCA TGGGAACCGC TTGCGGAAAA TTCTTCAACT GCTCCGTTCT
TTCCATCACC GATGCCGGTG ACTCGGACAT CCTGACAAGT GGAACCAAGG AGTAAAGTAA
ACCTAGTTCC GTTGATAAAT GCGTATTCTT CGTGCGGAAG CTCGTCTCGT TCATCCTATT
GCGCTGGTTG CTCTTCCAAC ATCCTCGATA GTAGGAGTAT TTTAAC
 
Protein sequence
MVSKKAKKQQ DSMNSRLKLV MKSGKAMLGY KASVKALRKG KAKMVLVASN CPHLRKSEVE 
YLAMLAKTQV HHYAGDNTAM GTACGKFFNC SVLSITDAGD SDILTSGTKE