Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_43840 |
Symbol | |
ID | 7203967 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 200583 |
End bp | 201528 |
Gene Length | 946 bp |
Protein Length | 110 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186297 |
Protein GI | 219113427 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.881392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCTCGATCAA GTACCTTTGC TTTATCCTGC TGAGAAACTG TAGTAAAGGG GCAACGTAGA TTTCAACTTG TTAATCCACA AAATCAACCA TGGTGTCCAA GAAAGCGGTA CGTCAATGAC TCCGGAGGTC GGCACAGTTA ATTTGCCCGC CCGAGATGGT AGTCTTTGAT GAACCCAATC GATGGTCGGT GTAGACGGCT GGGGTGCCTT GTATGATTCA AGTGAACAAA AGCAGCTTTA AGGCTCATTG ATGTAGATTC TCCTGCATCA AGGACGTTAT TTGCTGGCGA CGATAGGACG TGAAGGCTGG TAATCCCGGT CCGTTGCGTT CGAGTCTTTC CTTTATGAAT CATATATGTT GGTATCTCCC AGTCGCCTTC CCGATTGTAT TTCAATAACT ATATTGGCCG TGAACTTCAG TCACTACCAT TCCGGGCGGG AGGAGATGAA ATCATGTTCT CCCAGGTTCA GCACTAACAA AAAACTTTTT TCCCTCCCTG TCTTTCCGCA ACGAGCGTAG AAGAAGCAAC AAGACTCAAT GAACAGTCGT CTCAAGCTGG TCATGAAGTC CGGTAAGGCC ATGCTCGGGT ACAAGGCCTC CGTCAAGGCT CTGCGCAAGG GGAAGGCTAA AATGGTCCTT GTCGCCTCGA ACTGTCCGCA TTTGCGTAAA TCGGAAGTCG AGTATTTGGC CATGTTGGCC AAGACACAGG TACATCACTA CGCCGGCGAC AACACGGCCA TGGGAACCGC TTGCGGAAAA TTCTTCAACT GCTCCGTTCT TTCCATCACC GATGCCGGTG ACTCGGACAT CCTGACAAGT GGAACCAAGG AGTAAAGTAA ACCTAGTTCC GTTGATAAAT GCGTATTCTT CGTGCGGAAG CTCGTCTCGT TCATCCTATT GCGCTGGTTG CTCTTCCAAC ATCCTCGATA GTAGGAGTAT TTTAAC
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Protein sequence | MVSKKAKKQQ DSMNSRLKLV MKSGKAMLGY KASVKALRKG KAKMVLVASN CPHLRKSEVE YLAMLAKTQV HHYAGDNTAM GTACGKFFNC SVLSITDAGD SDILTSGTKE
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