Gene PHATR_43826 details

Gene Information

• Locus tag: PHATR_43826
• ID: 7203959
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 149284
• End bp: 152986
• Gene Length: 3703 bp
• Protein Length: 1003 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002186287
• Protein GI: 219113407

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.911661
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACAA TGCGCCCCGA AGCTCGAGCA TCAGTTTCGG ATGGATTAGA ACGAGTAGAC 
GAGGACGATA TCTCCTTGTC CAGTACTTCC GAAAGTGGGT CGTCGGGTGC CCAAGTCATT 
CTCACCTCCG ACGAACGAGA TAAAAAGATC CGAGATCAGA TTATCAAAAA AGAAGAGGCA 
GATGTTAGGA AAGCGAAACT AATCGTCGGC TCTGCTCTGA TTCTGTCCAC TATCTTAGTT 
AGTGTCTGCA TCTACATTTT CGCATCTAAA GCAGAGGTCC TCAATTTCGA GCTCGAGGTA 
AGCACCATTG TTGAATCATA GAGGTAGCGG TTGGATAATG CTATCTCACA ACTCACTACA 
CCACTCTCAC AGCACGAAGG ATATGCTAAG AACATTGTGA ACTTGGTAAA ATGGGAAAAC 
CAGTATAATT TTGCTCTTAT GCAACAATTA AGCGCATCAG CTACGGCATC TGCCGCCATG 
ACTGGCTCGG TGTTCCCCAA CGTGACCCAG AAGTACTTCG AGATCACAGG TGGCTATGTG 
GATGGCTTGG GCGGTATAAT GGCAACTGCC TACGCTCCAA TTATTGCAGC CGAGGAAGTG 
ACTCAGTGGG AAACATATTC ACAAGAGAAC CAAGGTTGGA TTGGAGACAG TACTGTACTT 
CGGCAAGTCC ATCCGGGACA TAGACAACCC ATGGAAGGTA CCATTCAAGA CCACGAATTC 
GATCGACGAC TTGATTCCGG GTCCATCAAG CCATATATTT GGCGTTGGGA AGATGGCGAG 
CAAGTCCAAG AAACCACCTT TTCGGGCAAT GTACTGGCTC CTTTTTGGCA AAGTTCTCCG 
GCCGATGCCG CTTCTGTAAA CCAAAACTCC TCGCAAACAA GGACATAGCT CACCTATTTT 
CTCTGGTTGT AGAAATGAAC CATACAGTCA TCTCCCACGC CGTCCAAATT GACAGGCTCT 
TTGATTTCGT CTTTGACCTC CATGAAAAAG AAAGAAAGAA AGAAGAACCC GCATTCATTT 
ATCATGGAAC CTGTCTACGC AGAGTTCTCC GAGAATCCCG TTCTTGTCGG TATTTTGATT 
GCCATTTCTG CATGGGAAAA TTTATTTGAT CGAGTGTTGC CAGAGGGAAC AAACGGGCTA 
GTCTGTGTTG TAAAGGATAC CTGCGGCAAC GTTTTTACGT ACGAAATCAA CGGCGAAATT 
GCAACTCATC TTGGATATCT TGACCTCCAT GACGAGAGAT TTGATCAATA CCAAAGAACA 
ACACCTATCG AGTTGTATGA TTCCGAGGCA GCCAGCCTTT GCAAACATGA CCTTTACATT 
TATCCATCGT CGACTTTCCG AAGTGCATAC AATACCAACA GACCAGCCAT CTACAAAAGT 
GTAGTCGCGT TAGCGTTTGC TTTCACTGCA CTACTGCTTC TCATGTACGA CAAGCTAGTA 
AGTCGACGTC AGGAGAAGAC AATGACGTCC GCCATTCGCA CCAACGCCTT GGTATCATCA 
CTTTCCCCGA AAATATCCGC GATCGACTTA TCGGTTACAA CGGACTTGAC CACGGTTCAA 
AAATGATTTC CGGGAATGAA AAAACAATGG AAAACTACGG GAATAAAGCT ATTGTAAATG 
CACCATTCCA TTCAAGACCC ATTGCAGATT TTTTCCCGCA AACAACGGTA CGTATATTGA 
AAGACAAAGA GCGACATTTG GCTTCCTCCT TCTGACTTTT ATTTTTAAAG ATCATGTTTG 
CCGATATCAC GGGCTTCACA TCCTGGGCCA GCGCAAGAGG TAAGTGAGGG AGGGTTAGAT 
CTGACGAATG ATGAAGAGAC CTCATCTTGG TAAATTATTC CACGCACAGA GCCATTCCAG 
GTATTTGAGC TCCTTGAAAC AATATACGGC GCCTTTGACG AGATTGCAAA GAAACGTAGG 
GTTTTCAAAG TTGAAACTGT TGGGGACTGC TATGTGGCTG TTGCCGGTAT CCCGATGCAA 
CGCAAAGATC ATGCTGTTAC AATGGCCCGA TACGCTCGTG ATTGCCACCA CAAAATGAAC 
GAGCTGACTC GTCGGCTGGA ACTCGTCTTC GGGCCTGATA CCGCTGATCT TGCCTTTAGA 
ATTGGTCTTC ATAGCGGGCC TGTGACTGGC GGGGTACTAC GTGGGGAAAA CGCCAGGTTT 
CAGCTCTTTG GAGACACCGT CAATACAGCT GCTCGGATGG AAAGCACAGG TGTTCGCAAC 
CGTGTGCATA TCTCTGAGAC CACTGCCGAT CTACTGGTTC AAAGCGGAAA AGAACATTGG 
CTCAAACAAC GAGATATGAA GATCATTGCA AAAGGGAAGG GAGAAATGTC TACGTTCTGG 
CTCCAACTTG GGACCGAGCA CAGCGACGGA ACGTCAGTCT CTGGTACCAA TCACGTTGCT 
GACAAGAATG AAACATTGGA GGAAGAAAAA CATAAGCTTC AATCACTAGC TTCCGATAAA 
ACAAGACGAT TGATTGATTG GAATGTCGAA GTGCTCTTGC GTCTCCTCGG TCAAATCGTT 
GCGTGCAGAA TTACACACCC GGTCAAGATT TCCGGAGTTT TCGTTCGGAA TAGCGCGTCT 
CCGAAGGGGC AAACAGTTCT TGAGGAAGTT AAAGAAATCA TAACTTTGCC TAATTTCAAC 
GCCAAAAGCG CAGAGCTCAG AAAAAAAGAT TCGGCAACAA CACAGCTCAA TGATGATGTG 
GTCCAGCAAC TACGTGAATA CGTAGCGAAT GTTGCAGCTC TGTATCGCTG TAATCCTTTC 
CATAATTTTG AACACGCTTC GCACGTGACC ATGTCAGTAG TCAAACTGCT CAGCCGAATA 
GTAGTCCCAG CGGATGTTGA CTATGAAAAT CTTGATACGG ATAAAATTGC GTCAACCCTG 
CACGATCACA CCTACGGAAT CACTTCAGAT CCTTTGACTC AATTTGCCTG CGTCTTTTCG 
GCTTTAATTC ACGATGTCGA CCCATAGTGG CGTTCCGAAC TCGCAACTAA TTAAGGAAGA 
CACGAAACTT GCTGCATTTT ACAAGGGCAA GAGTATCGCC GAACAGAATG CGGTTGATTT 
GGCATGGGAT CTGCTCAACG AAGACTCATA CAGCAGTCTG CGGGCGGCGA TATATCGCGA 
CGACATCGAG CGAAAACGAT TCCGACAGCT GGTGGTCAAT TTGGTCATGG CCACAGACAT 
AATGGATGCG GATCTCAAAA TCCTGCGCAA TGCTCGATGG AACAAGGCAT TTTCCGAAGC 
AAGTTTGCAA GAATCCATGG TCCAATCAAC AAATCGTAAG GCAACAATTG TGATTGAGCA 
CTTGATTCAG GCATCAGACG TTGCTCACAC GATGCAGCAC TGGCATATCT ATCGCAAATG 
GAATGAGCGA TTGTTCGAAG AAATGTACAA CGCGTTTATT GATGGTCGGG CAGAGAAGAA 
TCCGGCGGAG TTCTGGTACC AAGGGGAGCT GGGATTTTTC GACTTTTACA TTGTTCCGCT 
TGCAAAAAAA CTGGAGGAAT GTGGAGTCTT TGGGGTGTCG AGCGAAGAGT ACTTGAATTA 
TGCGCTACGC AACCGTCAAA AATGGTCAGA CAAAGGGCAA CAAATGTAGG GGATATGATG 
CAGAAATTGT CTCAAGGAGC GAGCCAAGTC AAAAGAAATG ATTGCAAGCA AGACATGCTT 
TTCCTTTAAC CGTGGCGATG TGTATGCACA TGGCCGATTT CGT 

 

Protein sequence

MTTMRPEARA SVSDGLERVD EDDISLSSTS ESGSSGAQVI LTSDERDKKI RDQIIKKEEA 
DVRKAKLIVG SALILSTILV SVCIYIFASK AEVLNFELEH EGYAKNIVNL VKWENQYNFA 
LMQQLSASAT ASAAMTGSVF PNVTQKYFEI TGGYVDGLGG IMATAYAPII AAEEVTQWET 
YSQENQGWIG DSTVLRQVHP GHRQPMEGTI QDHEFDRRLD SGSIKPYIWR WEDGEQVQET 
TFSGNVLAPF WQSSPADAAS SSPTPSKLTG SLISSLTSMK KKERKKNPHS FIMEPVYAEF 
SENPVLVGIL IAISAWENLF DRVLPEGTNG LVCVVKDTCG NVFTYEINGE IATHLGYLDL 
HDERFDQYQR TTPIELYDSE AASLCKHDLY IYPSSTFRSA YNTNRPAIYK SVVALAFAFT 
ALLLLMYDKL IMFADITGFT SWASAREPFQ VFELLETIYG AFDEIAKKRR VFKVETVGDC 
YVAVAGIPMQ RKDHAVTMAR YARDCHHKMN ELTRRLELVF GPDTADLAFR IGLHSGPVTG 
GVLRGENARF QLFGDTVNTA ARMESTGVRN RVHISETTAD LLVQSGKEHW LKQRDMKIIA 
KGKGEMSTFW LQLGTEHSDG TSVSGTNHVA DKNETLEEEK HKLQSLASDK TRRLIDWNVE 
VLLRLLGQIV ACRITHPVKI SGVFVRNSAS PKGQTVLEEV KEIITLPNFN AKSAELRKKD 
SATTQLNDDV VQQLREYVAN VAALYRCNPF HNFEHASHVT MSVVKLLSRI VVPADVDYEN 
LDTDKIASTL HDHTYGITSD PLTQFACVFS ALIHDVDPYI AEQNAVDLAW DLLNEDSYSS 
LRAAIYRDDI ERKRFRQLVV NLVMATDIMD ADLKILRNAR WNKAFSEASL QESMVQSTNR 
KATIVIEHLI QASDVAHTMQ HWHIYRKWNE RLFEEMYNAF IDGRAEKNPA EFWYQGELGF 
FDFYIVPLAK KLEECGVFGV SSEEYLNYAL RNRQKWSDKG QQM