Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_43808 |
Symbol | |
ID | 7203947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | + |
Start bp | 76323 |
End bp | 77867 |
Gene Length | 1545 bp |
Protein Length | 271 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185994 |
Protein GI | 219112821 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.353784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTCGTCTTTA TCTTCTGATA CAGTTCAGCC TTGTCCGTTT CCACCGCAGG CAGCGTATTG ATCATGTTTG GTTGGTTGTG GAAGAACGTC TTTGGCGGCG AGGACCTCGA GAAGAAGCCC AAGGACGTTT CCACTGATCA AAGGGGGCAT GCCGTACCCA AGTCGACGCT GGTACCTTCC TCTACCGAAA CGGGGGCGAC TCTGTCTTCA GGTACACCAG TAGTGTCGCC GCCGCGATCA CAAAAAACTT CTGTGAAAGA CCCACAAACT TCGTTGACGA AAAAGCGCAT GTCCGAAAGT CAATCGTCGT CTGGAGGAAA GAAAGCGAGA ACTTTGATTT CATCACCGGC GCGCAAACCG TCCAAGAGCG ACCCTGTTTC CGAGGCGTGG GAAGCGAATT TTGCCAAAGT GAGAGAGCTT TTCGAGTTGC ACCACTCTCT TGAAAACTTT TCAGCGCATT GCAAGGATGA CACGCTAGTT TCTTGGGTAG AAGATCAACA GAAGCAGTAC GAAAACGACA GAGCAAACAG CTCCTTCAAA AAGAGCTTTG TTGCCAGAAA TCAGTTTGTT CGGCTTGTCG ATATTGGTGC CATCCAGTTG TTATCCCCTC GTCAAGACGT CACGATAGAC AGAGACTTTG ATGTCATGCT TGGCAAACTC GCCGCGTTCA ACGAGACCCA CAAGGACGCT TTGGTCCCTC CACAGTTTGA GGACCAGGAA CTCGCCAAGT GGGTCAAAAG TCTCAGGAGC AAATGGGGGC GTTTGCGTCG CGGCACAAGC TCCAATTTTT CCGTTCACCA GATGGAAAAG CTAAACGCGA TTGGTTTTGA ATTCACGTGT TCTCGGGGTC GCCCGCGTGA CTTCACCAAA AAAGAGTAGG AAGGAGACAA CACCGTTCGT AAAGGCGGTT GGATTCAACA GATGAGAGAG GCGGGCAACA GGTCTGACGG TAGATGGATG AATCCCAATT TGACGAATAA GGTTAGATCC AAAGAATCAA AAGTAAATGC AATGCAAATT AAAACTTGTA AAGAATCCCC AACGTGAAGT ATGCTACTAC CGCCGTCTCC CAAGGGATGG GCGAAAATAT CGATGTCCAG CAGATCTACC TTCACATTAA TTTTCATGGA AAGGCACATT ACAATTTTAA AATGCTTGAC AAGTGAAACC TTCAACGTAC GCAAGCATTT CGAGTTATGA TGTATTCCGC ACAAAGTGCC ATACTGCGGA AATATTCAAA CGGTGTATGC TTGTCTGGAA TCCCAATCTC ACAATCGTCA TTGCTGACCC AAACGCCACC TTTTTTTATC CAGCTTTTCT CCGACAAAAA TTGCAAAGGA AGCTGGGGAA CAGAAATCCC TGAAGACGTC TCAACGTGCT TCGCGTAGTA TCCTTCGCTT GACTGTGAGG ATTTCTGAAT CAAGTCAATC TTGTTTTTGG TTGATATTTC CGTCACTGCT CTTGGCTTCC CTTCCTTTTG TAGGTTGGCT CACGGACAAT ACCTTTTCTC TAAAAGGAAG AATCGCATTC TTTTGATGGT GGCTG
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Protein sequence | MFGWLWKNVF GGEDLEKKPK DVSTDQRGHA VPKSTLVPSS TETGATLSSG TPVVSPPRSQ KTSVKDPQTS LTKKRMSESQ SSSGGKKART LISSPARKPS KSDPVSEAWE ANFAKVRELF ELHHSLENFS AHCKDDTLVS WVEDQQKQYE NDRANSSFKK SFVARNQFVR LVDIGAIQLL SPRQDVTIDR DFDVMLGKLA AFNETHKDAL VPPQFEDQEL AKWVKSLRSK WGRLRRGTSS NFSVHQMEKL NAIGFEFTCS RGRPRDFTKK E
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