Gene PHATR_43808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_43808 
Symbol 
ID7203947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp76323 
End bp77867 
Gene Length1545 bp 
Protein Length271 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185994 
Protein GI219112821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.353784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTCGTCTTTA TCTTCTGATA CAGTTCAGCC TTGTCCGTTT CCACCGCAGG CAGCGTATTG 
ATCATGTTTG GTTGGTTGTG GAAGAACGTC TTTGGCGGCG AGGACCTCGA GAAGAAGCCC
AAGGACGTTT CCACTGATCA AAGGGGGCAT GCCGTACCCA AGTCGACGCT GGTACCTTCC
TCTACCGAAA CGGGGGCGAC TCTGTCTTCA GGTACACCAG TAGTGTCGCC GCCGCGATCA
CAAAAAACTT CTGTGAAAGA CCCACAAACT TCGTTGACGA AAAAGCGCAT GTCCGAAAGT
CAATCGTCGT CTGGAGGAAA GAAAGCGAGA ACTTTGATTT CATCACCGGC GCGCAAACCG
TCCAAGAGCG ACCCTGTTTC CGAGGCGTGG GAAGCGAATT TTGCCAAAGT GAGAGAGCTT
TTCGAGTTGC ACCACTCTCT TGAAAACTTT TCAGCGCATT GCAAGGATGA CACGCTAGTT
TCTTGGGTAG AAGATCAACA GAAGCAGTAC GAAAACGACA GAGCAAACAG CTCCTTCAAA
AAGAGCTTTG TTGCCAGAAA TCAGTTTGTT CGGCTTGTCG ATATTGGTGC CATCCAGTTG
TTATCCCCTC GTCAAGACGT CACGATAGAC AGAGACTTTG ATGTCATGCT TGGCAAACTC
GCCGCGTTCA ACGAGACCCA CAAGGACGCT TTGGTCCCTC CACAGTTTGA GGACCAGGAA
CTCGCCAAGT GGGTCAAAAG TCTCAGGAGC AAATGGGGGC GTTTGCGTCG CGGCACAAGC
TCCAATTTTT CCGTTCACCA GATGGAAAAG CTAAACGCGA TTGGTTTTGA ATTCACGTGT
TCTCGGGGTC GCCCGCGTGA CTTCACCAAA AAAGAGTAGG AAGGAGACAA CACCGTTCGT
AAAGGCGGTT GGATTCAACA GATGAGAGAG GCGGGCAACA GGTCTGACGG TAGATGGATG
AATCCCAATT TGACGAATAA GGTTAGATCC AAAGAATCAA AAGTAAATGC AATGCAAATT
AAAACTTGTA AAGAATCCCC AACGTGAAGT ATGCTACTAC CGCCGTCTCC CAAGGGATGG
GCGAAAATAT CGATGTCCAG CAGATCTACC TTCACATTAA TTTTCATGGA AAGGCACATT
ACAATTTTAA AATGCTTGAC AAGTGAAACC TTCAACGTAC GCAAGCATTT CGAGTTATGA
TGTATTCCGC ACAAAGTGCC ATACTGCGGA AATATTCAAA CGGTGTATGC TTGTCTGGAA
TCCCAATCTC ACAATCGTCA TTGCTGACCC AAACGCCACC TTTTTTTATC CAGCTTTTCT
CCGACAAAAA TTGCAAAGGA AGCTGGGGAA CAGAAATCCC TGAAGACGTC TCAACGTGCT
TCGCGTAGTA TCCTTCGCTT GACTGTGAGG ATTTCTGAAT CAAGTCAATC TTGTTTTTGG
TTGATATTTC CGTCACTGCT CTTGGCTTCC CTTCCTTTTG TAGGTTGGCT CACGGACAAT
ACCTTTTCTC TAAAAGGAAG AATCGCATTC TTTTGATGGT GGCTG
 
Protein sequence
MFGWLWKNVF GGEDLEKKPK DVSTDQRGHA VPKSTLVPSS TETGATLSSG TPVVSPPRSQ 
KTSVKDPQTS LTKKRMSESQ SSSGGKKART LISSPARKPS KSDPVSEAWE ANFAKVRELF
ELHHSLENFS AHCKDDTLVS WVEDQQKQYE NDRANSSFKK SFVARNQFVR LVDIGAIQLL
SPRQDVTIDR DFDVMLGKLA AFNETHKDAL VPPQFEDQEL AKWVKSLRSK WGRLRRGTSS
NFSVHQMEKL NAIGFEFTCS RGRPRDFTKK E