Gene PHATR_43799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_43799 
Symbol 
ID7204160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp43342 
End bp44698 
Gene Length1357 bp 
Protein Length149 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185989 
Protein GI219112811 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTGA ACGGTAGTTG TTTGTGTGAA GTCATCCGGT TCTCCGCCAC ACTCAAGCAA 
AAACACGTCG ACGTTTGTCA TTGCGATATG TGTCGCAAGT GGCACGGTGG AATGGGTTTC
AGTGTCCCCT TGACGGAGCC GCCCACGCTT CTATCGGGTA AGGAGGACGG TCAATTGAGT
CTGTACCAGT CTTCGGAATG GGGACAACGC TTGTTTTGTA AAACCTGCGG TTCGTGTCTC
TTTTATCAGG CCCCCGACTA CGGATACTAC GGTGTGGTTC CGGGAGTTTT GGACGAAGAA
GATCAACTCG AAGAGATGAA ATTGGAAATC TTTACGGATC AGAAACCGTC CTATTACTAC
GACTTTGCGG GGGATACGAA AAAGATGACC AGGGCCGAGT TTCTCGCCTC CTTGGAGTCC
AAGGACTGTG GTGGCGAACA AACTGAATAA GCAGTGGAGA CTCACAGTTA TTCAGTCAGG
CAGTCGGTGG TTATCTTCCG CGAGTGCGTA GCTGACGCTG TTTCTGAACA GACCGTGTGC
AGAAAGGCGA ACCGGTACGC ATTCCACTTT GAAACGCAAC GAAACACATG GATATTGTAT
GGGGCAGGGT CGCCCACGAA ATGCGGGTGC ATTCTTGAAT AAAGACTAAC GATCAAAAGA
TATAGTAGCA GACGTTACCC AGGAGTAGGA AACAGAATGG GCTGTTCCTG TTGTCATCTT
CGAGACAGTA ACAAAAGTTG GAGCATAGGA AACGTGTCCC AATGTTGGGT CTACTTTGGG
ATAGTCGCAC AGACAAAGTG GTCGGTCGGA GTCGGAGTCT GATTGCGTGC GCAATAGGGA
CACACACCAT TGGAAACAAC GGCCCCTTTG CTCCCCCGTG TTTGTGGAAG CACAAAGGTC
GACTGTCGTT CTCAAAGGTC ATCGTCGTCA TCCTCGCTGC TACTGGCTTG TAAAAGAGCT
TCTTGCAAGC GCTGCAGCGC AACGGCTTCG GTTCCACGGT GGGCCTCGTT GGTGGTTCCG
GACGAATTGA GGGGTTGCAC AGTGGCTGGC GGTGCCGTAG TGCCAGCCGC TTCCCTAGCC
CGACTCAGGC AGGCTTCTTC CTCGCGTAGT TGTTCCAAGA CTTCCGTCAA CATCCTTTCC
TTGGCTTGCA AGGCATCGTA TTCGTCATCC AGGACTCTCC GACGGTCCTC TAGCGCGTTT
CGACACTCCT CGCGGGGCAC GGGAGGGGAA GGTTGGTCGG GAGAAGGCAT TCGGGTCGGT
TTTGGTCGGT CGGTCGGTCG GTCTCAGTCG AACTCTCCAC CAACCAGCAA GCGTTGAATG
GATTTTACTT GAATGGACAC ATAACAGTAA AACAGGA
 
Protein sequence
MKVNGSCLCE VIRFSATLKQ KHVDVCHCDM CRKWHGGMGF SVPLTEPPTL LSGKEDGQLS 
LYQSSEWGQR LFCKTCGSCL FYQAPDYGYY GVVPGVLDEE DQLEEMKLEI FTDQKPSYYY
DFAGDTKKMT RAEFLASLES KDCGGEQTE