| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_4227 |
|---|
| Symbol | |
|---|
| ID | 7204405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011671 |
|---|
| Strand | - |
|---|
| Start bp | 662155 |
|---|
| End bp | 663135 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002186392 |
|---|
| Protein GI | 219113617 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.754844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ACCGTTTGGC GGGATCTCAT TAGTTCCGCG CCCGACGCCA AGTTTCCACC CGCAGCGGGA
CGTTACCATC TCTATTGTTC CTATGCGTGC CCCGGCTCTC ATCGTGCCCT TATAATGCGT
ACCTTGAAAG GCCTTGAGGA TGTCGTTTCG GTTACATACG TCCATCCAAC CTGGAGACTT
ACAAATCCGG ATAACCCCAA TGATAAACAT CGAGGATGGG TATTTGGTGA CCCTCTTGGA
CAGCCTTTCT CTAATACAAT CAACCGCGGT GGACCATTCC CTCCCGCATA CACCGGGAAC
AAACCTGATC CCCACTTTGA CGCCTTCAGC ATTCGCGAAA TCTATGAAGT TGCACACGAC
ACCAGTGGTA AATACACTAT CCCGCTACTA TGGGATTCAA GACTTAACAC CATCGTGAAC
AACGAATCCT CCGACATCGC CTACATGTTC AACTCCTGTT TCAATGCTTT CGCTGCTAAC
GGCGATCTAG ATCTCTACAC TGAGGATAAC GAAGAAGGCA TGGCAAAGTT GAACGAGGTC
AACGAATGGC TGAGCCCGCT AATGATAAAT GGTGTCTATC GCTGCGGATT TGCGAAAAAC
CAGCGCGCCT ACGACACGGC AATAGACGAG CTCTGTAAGG CATTCGACCA CGCCGATGAC
ATTCTGCAGA ACCAAAGGTA CTTGACAGGA AACACACTTA CAGATGCTGA CATCCGTCTA
TTTGTTACTT TGTTGCGATT CGATGAAGTC TATGCAATTT ACTTTCGAGC GAACGCGCGA
TTGGTAATGC TGACACCGTC GCTTTTGAGT TTCTGTCGCG AGATCTACCA AATGACCGGT
GTTGCCGCTA CTTGCGACAT GGAGCAGATT AAAGCTCATT TCTTTGGATC TCATCCGGAA
TGGAATAACT ATTCTGTAGT CCCTCGCGGT CTGGGCTTCA TGGAGCTGTT GGACATGCCT
CATGACCGAG AGAAGCTTTC T
|
|---|
| Protein sequence | TVWRDLISSA PDAKFPPAAG RYHLYCSYAC PGSHRALIMR TLKGLEDVVS VTYVHPTWRL
TNPDNPNDKH RGWVFGDPLG QPFSNTINRG GPFPPAYTGN KPDPHFDAFS IREIYEVAHD
TSGKYTIPLL WDSRLNTIVN NESSDIAYMF NSCFNAFAAN GDLDLYTEDN EEGMAKLNEV
NEWLSPLMIN GVYRCGFAKN QRAYDTAIDE LCKAFDHADD ILQNQRYLTG NTLTDADIRL
FVTLLRFDEV YAIYFRANAR LVMLTPSLLS FCREIYQMTG VAATCDMEQI KAHFFGSHPE
WNNYSVVPRG LGFMELLDMP HDREKLS
|
|---|
| |