Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_41785 |
Symbol | |
ID | 7204376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 521349 |
End bp | 522461 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186364 |
Protein GI | 219113561 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.982896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTGA AACCCGATTT ACTCAAGGGG ATTTACGCGT ACGGATTTGA AAAACCGAGC GCCATTCAGC AGCGTGCCAT TCGACCCATC ATTCGCGGCC GGGACGTGAT TGCCCAGAGC CAGTCCGGAA CGGGCAAGAC GGCCGTCTTT TCCGTTTCCA GTCTACAACT GTTGCAAGAG AATTCACGGG AGTGTCAAGT TTTGATTCTC AGTCCGACAC GGGAATTGGC GGAACAAACA CAAAAGGTCG TGCAAGCCTT GGGTGATTTC ATGAACGTGC ATTGCCACGC GTGTATTGGC GGGAAAAGCC TCGGACAGGA TTTGAACGCG TTGGAAAAAG GAGGAATTCA GATTATCTCC GGTACACCTG GACGTGTTTT CGATTTGATT CGACGGAACG CTCTGTCTCC CAACCATCTT AAAGCCATGA TTCTGGACGA AGCGGACGAA ATGCTCAACC GGGGTTTCAA AGAACAGATT TACGATATTT ATCGGTTTTT GCCAGCATCG ACCCAGGTGG TTTTGATGAG TGCCACGCTG CCCGCCAGCG TTCTAGACAT GACACGCAAG TTCATGAACG ATCCTATTCG CATCTTGGTT CGGCGCGACG AGTTGACGTT GGAAGGCATC CGACAGTTCT TTATCAATGT GGAAAAGGAA GAATGGAAAT TTGACACACT CTGTGACCTA TACGATACGT TGACGATCAC GCAAGCCGTA ATCTTTTGCA ATACGAAACA AAAGGTCGAT TGGTTGGCGG GGAAGATGAA AGACAAGAAC TTTACAGTGT CAGCCATGCA CGGGGATATG GATCAAGGTG CACGCGATGC GGTCATGGAA GAGTTTCGCT CTGGATCTTC GCGCGTGTTG ATCGCGACGG ATTTGTGGGG ACGGGGTATT GATGTCCAGC AAGTCAGCTT GGTCATCTGC TACGATCTTC CAACGAACCG CGAGTTGTAC ATTCATCGGA TCGGGCGGTC TGGTCGGTTT GGTCGCAAGG GAATTGCGAT CAACTTTGTC CGCGAAGAAG ACACCCGACT ACTTCGAGAT ATTGAGCAGT TTTACAGTAC GCAAATCGAG GAGATGCCAA CAAATGTGGG TGATTTACTG TAG
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Protein sequence | MQLKPDLLKG IYAYGFEKPS AIQQRAIRPI IRGRDVIAQS QSGTGKTAVF SVSSLQLLQE NSRECQVLIL SPTRELAEQT QKVVQALGDF MNVHCHACIG GKSLGQDLNA LEKGGIQIIS GTPGRVFDLI RRNALSPNHL KAMILDEADE MLNRGFKEQI YDIYRFLPAS TQVVLMSATL PASVLDMTRK FMNDPIRILV RRDELTLEGI RQFFINVEKE EWKFDTLCDL YDTLTITQAV IFCNTKQKVD WLAGKMKDKN FTVSAMHGDM DQGARDAVME EFRSGSSRVL IATDLWGRGI DVQQVSLVIC YDLPTNRELY IHRIGRSGRF GRKGIAINFV REEDTRLLRD IEQFYSTQIE EMPTNVGDLL
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