Gene PHATR_41785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_41785 
Symbol 
ID7204376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp521349 
End bp522461 
Gene Length1113 bp 
Protein Length370 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186364 
Protein GI219113561 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.982896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTGA AACCCGATTT ACTCAAGGGG ATTTACGCGT ACGGATTTGA AAAACCGAGC 
GCCATTCAGC AGCGTGCCAT TCGACCCATC ATTCGCGGCC GGGACGTGAT TGCCCAGAGC
CAGTCCGGAA CGGGCAAGAC GGCCGTCTTT TCCGTTTCCA GTCTACAACT GTTGCAAGAG
AATTCACGGG AGTGTCAAGT TTTGATTCTC AGTCCGACAC GGGAATTGGC GGAACAAACA
CAAAAGGTCG TGCAAGCCTT GGGTGATTTC ATGAACGTGC ATTGCCACGC GTGTATTGGC
GGGAAAAGCC TCGGACAGGA TTTGAACGCG TTGGAAAAAG GAGGAATTCA GATTATCTCC
GGTACACCTG GACGTGTTTT CGATTTGATT CGACGGAACG CTCTGTCTCC CAACCATCTT
AAAGCCATGA TTCTGGACGA AGCGGACGAA ATGCTCAACC GGGGTTTCAA AGAACAGATT
TACGATATTT ATCGGTTTTT GCCAGCATCG ACCCAGGTGG TTTTGATGAG TGCCACGCTG
CCCGCCAGCG TTCTAGACAT GACACGCAAG TTCATGAACG ATCCTATTCG CATCTTGGTT
CGGCGCGACG AGTTGACGTT GGAAGGCATC CGACAGTTCT TTATCAATGT GGAAAAGGAA
GAATGGAAAT TTGACACACT CTGTGACCTA TACGATACGT TGACGATCAC GCAAGCCGTA
ATCTTTTGCA ATACGAAACA AAAGGTCGAT TGGTTGGCGG GGAAGATGAA AGACAAGAAC
TTTACAGTGT CAGCCATGCA CGGGGATATG GATCAAGGTG CACGCGATGC GGTCATGGAA
GAGTTTCGCT CTGGATCTTC GCGCGTGTTG ATCGCGACGG ATTTGTGGGG ACGGGGTATT
GATGTCCAGC AAGTCAGCTT GGTCATCTGC TACGATCTTC CAACGAACCG CGAGTTGTAC
ATTCATCGGA TCGGGCGGTC TGGTCGGTTT GGTCGCAAGG GAATTGCGAT CAACTTTGTC
CGCGAAGAAG ACACCCGACT ACTTCGAGAT ATTGAGCAGT TTTACAGTAC GCAAATCGAG
GAGATGCCAA CAAATGTGGG TGATTTACTG TAG
 
Protein sequence
MQLKPDLLKG IYAYGFEKPS AIQQRAIRPI IRGRDVIAQS QSGTGKTAVF SVSSLQLLQE 
NSRECQVLIL SPTRELAEQT QKVVQALGDF MNVHCHACIG GKSLGQDLNA LEKGGIQIIS
GTPGRVFDLI RRNALSPNHL KAMILDEADE MLNRGFKEQI YDIYRFLPAS TQVVLMSATL
PASVLDMTRK FMNDPIRILV RRDELTLEGI RQFFINVEKE EWKFDTLCDL YDTLTITQAV
IFCNTKQKVD WLAGKMKDKN FTVSAMHGDM DQGARDAVME EFRSGSSRVL IATDLWGRGI
DVQQVSLVIC YDLPTNRELY IHRIGRSGRF GRKGIAINFV REEDTRLLRD IEQFYSTQIE
EMPTNVGDLL