Gene PHATR_33624 details

Gene Information

• Locus tag: PHATR_33624
• ID: 7204069
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: +
• Start bp: 1398768
• End bp: 1400952
• Gene Length: 2185 bp
• Protein Length: 648 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002186245
• Protein GI: 219113323

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0268673
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCTTCC AACGAGACCA CTCCGCGAGA CCTTTCGGCG TGAAGAAGTT TATAATTTGC 
ACTTCTTCCC GTACCTGTTT GTTCCCCGAC CTCCAGCAGT GTGGTATGTT GTTTCTAGTC 
GTTCTGATTA CACAGCCGAT TGTTGGCCTA ACGTATCTCA TTTTTTTTTG TTCTGCTCAC 
ACATAAGGTA GCACTCTTAC ATAAAATTCC GAGTTACATT TAGTTTTATG AACGTTACGC 
CGCTGTTCCT CCTCGTCTGC CACTTGCTGT CGGCGAAGGT TCGGGGAGAA TCGTCTATTC 
GAGGAACGCA GAAAGAGGAG CAACACACTG TCGGAAAGCT ACAAGAGCAG TCTGTTGTTT 
GTATGGTGGA GCAGGTGGAT GTCAAATTTT CCAATTATGA ACCCTCACCC AGTAACGATG 
CGGCGAGTAC GGCGAACGAC AGCGACTCGG CATTCCTTTG TGTGACGGAC CAGGACAACG 
CGGCTGATCA ATCGTTCGTC ATTGACTTGC CACCTTTGGT CTTGGAGAAC ATGACGCATC 
ACGAGCATCC CGTTCTATCC ATTTCCGACG CGGTTCTGGA TAATGAAGCG GTTCAGCTTT 
CGGTCATCAA GGACGCCTCT ATTGATATTG ATGATTCACC ATCCCAACAC CGTTCTCTGG 
CGTCGGCAAC GGGTACTGGC CAAGTCCTGG TCTTACGGAT CACTTATCGT GGCATATCCC 
CCTCTCTGTC GGCCGATCAA CTGGCCTCAC GTGTTTTTGG CTTGGGTAAC AATCCGGAAC 
GTCACAGTCT TTCCAGCCAA ATCGATGCTT GTTCATTTAG GCAGTTACAA CTGAGACCAG 
CAGAGGGCGA TGACATTGTA AATGGCATTG CTGAAATTTC CATTGACAAG CGAGTAGCTG 
GCTCGAACTC GGTGCTGGCT TTGGATAATC TAGTGGTCGC TAACGCCACG CGACGGTTTG 
GTCGATTGAG TACCCAGTTC GCTCATGTCT TATTTGTCTT CCCAAGCGCT GGGCTTTTGT 
TTGGTGGACG TGGATGGTTG GCCTATGCCT ATTTCAACGG GTGGCGCTCC GTCTACAACG 
ACAAATGGGG TGGTAGCTTG TCCGCCTTGA TGCATGAAGT AGGGCACAAT CTTAACTTGA 
ACCACGCCGG ACGAGGTAGC CAAAACTATG GCGATGTCAC AGGTAGGTGC CTCAAGAAGG 
CTTTCCATGT ACTATTTCAT CCCGATTAAC TTATCGCGAT GTGTTTTGAA CGCATGGCGA 
CGGTAACTAG GCAGAGCTCA TTGATTTTGT TTCCTTCTTA TGCGGATTAG GTTACATGGG 
ATGGGGAACT TCTAAGATTG GTGCTCCCAC AAGCTGCTTT AATGCACAAA AGAGCTGGGC 
ACTGGGATGG TACAAAGATC GTTCCCTTTC ACTCTCTCTC CCAGATTTCC CTTGGGGAGG 
ACAGGTTGCC TTCTTCGGGG AGTACGACAA GACAACGCCG GATCAACCTG TTATTCTAAG 
TCTTGAAGAC GGCAGCAAGC GATTTTTTTT ACAGTACAAC CGCGCCAAAG GTATGAACGA 
GCAAACCCGA GAATTTCCCA ACCAGGTTGT CCTTGTCAGT GACGAAGGCC CGGGAGACGG 
AAGGTGGGGT CCGCAATCCC GGCTGGAAGG AGCTATCGGC TTGAACGAGC AAAGCACTCG 
ACGAAACTTT CGAATCCAAA ACTTTGAAGC ATCGGGCTTT CCTCTCTTTA TCCGAGTTTG 
TGATGAGGTG GAGGGCCCTC CCGACTTGGT ACGTCTCAGC ATTCACTTGG AAGATGGAAC 
GCAGAGTGAC ACTTGCAATT TAAATATAGA GGCTTCAGCG CAGACCACGC CTTGCGATGA 
CGACTTCTCG GCAGTGTTCT TCGTAGACCC CAATCGTGGG TACAAAGACT GCGGCTGGCT 
GGCTCGAGTG ATGGCAAAAA GTGATTTTTG GTCTGAGGCT TTGTGTCAAG AGGGCCACGA 
AGCCTACAAT GCATGCGCGG AGACATGTGG CAAATGTACA GACAAATGCG AAGACACCAC 
CGGAGCTTTT TTCTATGTCA ATGCTCGTCA TGGAAACAAG GATTGTGAGT GGCTTTCGAC 
GAGAACTCCT TGGCGTGAAA AATTATGTCA TGAAGGCAAC GCCGCATACG CTTACTGCCA 
AGAATCCTGC AACGTCTGCG ACTAA 

 

Protein sequence

MLFQRDHSAR PFGVKKFIIC TSSRTCLFPD LQQCVTFSFM NVTPLFLLVC HLLSAKVRGE 
SSIRGTQKEE QHTVGKLQEQ SVVCMVEQVD VKFSNYEPSP SNDAASTAND SDSAFLCVTD 
QDNAADQSFV IDLPPLVLEN MTHHEHPVLS ISDAVLDNEA VQLSVIKDAS IDIDDSPSQH 
RSLASATGTG QVLVLRITYR GISPSLSADQ LASRVFGLGN NPERHSLSSQ IDACSFRQLQ 
LRPAEGDDIV NGIAEISIDK RVAGSNSVLA LDNLVVANAT RRFGRLSTQF AHVLFVFPSA 
GLLFGGRGWL AYAYFNGWRS VYNDKWGGSL SALMHEVGHN LNLNHAGRGS QNYGDVTGYM 
GWGTSKIGAP TSCFNAQKSW ALGWYKDRSL SLSLPDFPWG GQVAFFGEYD KTTPDQPVIL 
SLEDGSKRFF LQYNRAKGMN EQTREFPNQV VLVSDEGPGD GRWGPQSRLE GAIGLNEQST 
RRNFRIQNFE ASGFPLFIRV CDEVEGPPDL VRLSIHLEDG TQSDTCNLNI EASAQTTPCD 
DDFSAVFFVD PNRGYKDCGW LARVMAKSDF WSEALCQEGH EAYNACAETC GKCTDKCEDT 
TGAFFYVNAR HGNKDCEWLS TRTPWREKLC HEGNAAYAYC QESCNVCD