Gene PHATR_33622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_33622 
Symbol 
ID7204138 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp1393073 
End bp1394388 
Gene Length1316 bp 
Protein Length295 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186522 
Protein GI219113877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAACT CCGAAGAGTG CTTCCTAGGA GTCCATGCGG AGGAGGGACC TTGCTGCTCC 
CCAACGTCTT TTGAGCACGA GGACGACAAG GAAGCTACAC AGATGACATG TGACGTTCTT
TGTTCTTTGA GTTCTTCGGC AGCGACTTCA CAACCACACG CTTCAGCCTC CGTAAAATCG
GAGGATTCCT GTGAATTTTC CCACGATTCC TCTAAGAGAA GGAATAGCAA GACTTGTGCT
AGCAAACAAT TTCAGCTACC CATGTTCCTC AGTAGTAAGT TTTCGTATCG ATTTGTTCGC
AATCGATTCT TTTGTATTTG CTGTCCCGGT GCTGCAAGAC TTTTTCGAAC ATGCACCGAA
CATCTGAAAA ATTCCCCCCC AATAGATCGA ATTTCCTAAT TTTTGAGGGA ACCTGGAACT
CGTGCTTTGA AAATGTCGGA AATATTCCGG AATGTTGACT GCACTTTTTC AATTTGCGAC
TCACCTCTTT CTGGACCTTG ATTTTATCTC ATTCCAGAGA CTTATCATAT GATTGACCGA
TGCGATTCAG AGATCGCTAC TTGGTCAGAA GCGGGTGATA ATTTTGTTGT GAAGAATACC
GAAAAGTTCG CGAGCGTAAG TAGCAATGAA ACGTATTCAC TGTCATCAGC TACTGTAAGA
ATCGGAAAAC GTAACTTTTT GCTCATTAGC ACCACTACTT TCCGTCGAAC AACAGAGCGT
CCTTCCTCGC TATTTCAAGC ATTCCAACTT TTCGAGCTTT GCTCGTCAAC TGAATTTCTA
CGGCTTTCGA AAGCTAAGGA CCGACCCAAT CTTGACTTCG GATGTGGATC CACACACCGC
ATGTTTCGTA CGATTCTATC ACGAAAAATT TCAAAAGGAC AAGCCACAGC TATTGCATCA
AATTAAACGA GCCACTAAGA CTGATCAGCA GTCCAAAGAT GAAGTTGAAT CTTTGAAACA
TGATGTAGCT AAGCTGAAGG AAACACTGAG CTTGACTGCG GCTCAATACG ACCAAAAACT
CGCGGAGCTT TCCTATGAGT GCAACCGACG CATAACTGCG ATGAATGCCG AGTACGACAA
GTTGGCCGCC TTAGTTCATT CCGCCATTAC ACCTCGTGAC AGCATTTTGG CTGCATCCTC
AGCGACTGCG TCTTCCAGTG CGTCGCAGGT CCCAGACTTG TTGCATTCAT TGAGTCAAGC
CGCAGTAAGT TTGCAGAACC ACCTAAGGGC TCCGTCGGCC TCTCATACGG GAGGGCCCAC
AAACACCACC ACACTCATCA TGCCGCCAGT CACATCAAAC CGCGAAGGCT CCTTAA
 
Protein sequence
MTNSEECFLG VHAEEGPCCS PTSFEHEDDK EATQMTCDVL CSLSSSAATS QPHASASVKS 
EDSCEFSHDS SKRRNSKTCA SKQFQLPMFL SKTYHMIDRC DSEIATWSEA GDNFVVKNTE
KFASSVLPRY FKHSNFSSFA RQLNFYGFRK LRTDPILTSD VDPHTACFVR FYHEKFQKDK
PQLLHQIKRA TKTDQQSKDE VESLKHDVAK LKETLSLTAA QYDQKLAELS YECNRRITAM
NAEYDKLAAL VHSAITPRDS ILAASSATAS SSASQVPDLL HSLSQAASHQ TAKAP