Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_33622 |
Symbol | |
ID | 7204138 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 1393073 |
End bp | 1394388 |
Gene Length | 1316 bp |
Protein Length | 295 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186522 |
Protein GI | 219113877 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAACT CCGAAGAGTG CTTCCTAGGA GTCCATGCGG AGGAGGGACC TTGCTGCTCC CCAACGTCTT TTGAGCACGA GGACGACAAG GAAGCTACAC AGATGACATG TGACGTTCTT TGTTCTTTGA GTTCTTCGGC AGCGACTTCA CAACCACACG CTTCAGCCTC CGTAAAATCG GAGGATTCCT GTGAATTTTC CCACGATTCC TCTAAGAGAA GGAATAGCAA GACTTGTGCT AGCAAACAAT TTCAGCTACC CATGTTCCTC AGTAGTAAGT TTTCGTATCG ATTTGTTCGC AATCGATTCT TTTGTATTTG CTGTCCCGGT GCTGCAAGAC TTTTTCGAAC ATGCACCGAA CATCTGAAAA ATTCCCCCCC AATAGATCGA ATTTCCTAAT TTTTGAGGGA ACCTGGAACT CGTGCTTTGA AAATGTCGGA AATATTCCGG AATGTTGACT GCACTTTTTC AATTTGCGAC TCACCTCTTT CTGGACCTTG ATTTTATCTC ATTCCAGAGA CTTATCATAT GATTGACCGA TGCGATTCAG AGATCGCTAC TTGGTCAGAA GCGGGTGATA ATTTTGTTGT GAAGAATACC GAAAAGTTCG CGAGCGTAAG TAGCAATGAA ACGTATTCAC TGTCATCAGC TACTGTAAGA ATCGGAAAAC GTAACTTTTT GCTCATTAGC ACCACTACTT TCCGTCGAAC AACAGAGCGT CCTTCCTCGC TATTTCAAGC ATTCCAACTT TTCGAGCTTT GCTCGTCAAC TGAATTTCTA CGGCTTTCGA AAGCTAAGGA CCGACCCAAT CTTGACTTCG GATGTGGATC CACACACCGC ATGTTTCGTA CGATTCTATC ACGAAAAATT TCAAAAGGAC AAGCCACAGC TATTGCATCA AATTAAACGA GCCACTAAGA CTGATCAGCA GTCCAAAGAT GAAGTTGAAT CTTTGAAACA TGATGTAGCT AAGCTGAAGG AAACACTGAG CTTGACTGCG GCTCAATACG ACCAAAAACT CGCGGAGCTT TCCTATGAGT GCAACCGACG CATAACTGCG ATGAATGCCG AGTACGACAA GTTGGCCGCC TTAGTTCATT CCGCCATTAC ACCTCGTGAC AGCATTTTGG CTGCATCCTC AGCGACTGCG TCTTCCAGTG CGTCGCAGGT CCCAGACTTG TTGCATTCAT TGAGTCAAGC CGCAGTAAGT TTGCAGAACC ACCTAAGGGC TCCGTCGGCC TCTCATACGG GAGGGCCCAC AAACACCACC ACACTCATCA TGCCGCCAGT CACATCAAAC CGCGAAGGCT CCTTAA
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Protein sequence | MTNSEECFLG VHAEEGPCCS PTSFEHEDDK EATQMTCDVL CSLSSSAATS QPHASASVKS EDSCEFSHDS SKRRNSKTCA SKQFQLPMFL SKTYHMIDRC DSEIATWSEA GDNFVVKNTE KFASSVLPRY FKHSNFSSFA RQLNFYGFRK LRTDPILTSD VDPHTACFVR FYHEKFQKDK PQLLHQIKRA TKTDQQSKDE VESLKHDVAK LKETLSLTAA QYDQKLAELS YECNRRITAM NAEYDKLAAL VHSAITPRDS ILAASSATAS SSASQVPDLL HSLSQAASHQ TAKAP
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